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Kouhki
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Joined: May 10, 2009
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Re: New Beta test Started Jan 30, 2012

Got one resend on my couple years old win i7. It's running fine but taking very looong time to finish. After 24 h elapsed time it shows 75% progress. At the moment it looks like finishing 3 h too late sad . Should have notised it some hours earlier and push it running.

BETA_ SN2S_ A37114_ 0000000_ 0123_ 2-- - In Progress 24.2.2012 20:38:39 26.2.2012 11:02:39 0.00 0.0 / 0.0 <- me
BETA_ SN2S_ A37114_ 0000000_ 0123_ 1-- 613 Pending Validation 20.2.2012 19:48:53 21.2.2012 09:08:52 12.75 194.9 / 0.0
BETA_ SN2S_ A37114_ 0000000_ 0123_ 0-- - No Reply 20.2.2012 19:48:52 24.2.2012 19:48:52 0.00 0.0 / 0.0
[Feb 26, 2012 7:41:11 AM]   Link   Report threatening or abusive post: please login first  Go to top 
KWSN - A Shrubbery
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Joined: Jan 8, 2006
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Re: New Beta test Started Jan 30, 2012

Don't worry about the deadline. You'll have at least another 12 hours to return it and still get credit. Whoever gets the fourth iteration will have to finish and return theirs before it goes away.
----------------------------------------

Distributed computing volunteer since September 27, 2000
[Feb 26, 2012 7:52:42 AM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
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Re: New Beta test Started Jan 30, 2012

Work unit BETA_SN2S_A37114_0000000_0343 has now errored out on five machines but is still being sent out -- it's currently running on two more. I thought they were supposed to be suppressed after five?

The result log on my machine was as follows:

<core_client_version>6.10.58</core_client_version>
<![CDATA[
<message>
- exit code 195 (0xc3)
</message>
<stderr_txt>
INFO: No state to restore. Start from the beginning.
[03:30:44] Number of tasks = 96
[03:30:44] Starting task 0,CPU time is 0.000000.
[03:30:44] ./ZINC00121627.pdbqt size = 27 6 ../../projects/www.worldcommunitygrid.org/beta14.target_A37114.pdbqt size = 37 0
[04:09:07] Vina exited normal 0.
[04:09:07] Finished task #0 cpu time used 2211.968750
.
.
.
[23:00:47] Starting task 48,CPU time is 66279.875000.
[23:00:47] ./ZINC00121960.pdbqt size = 25 2 ../../projects/www.worldcommunitygrid.org/beta14.target_A37114.pdbqt size = 37 0
[23:00:48] ERROR: Vina exited with exit code = 1
VINA Error:

Parse error on line 34 in file ".\ZINC00121960.pdbqt": Atom 26 has not been found in this branch

Retrying task.
[23:00:50] Starting task 48,CPU time is 66279.875000.
[23:00:50] ./ZINC00121960.pdbqt size = 25 2 ../../projects/www.worldcommunitygrid.org/beta14.target_A37114.pdbqt size = 37 0
Unable to update graphics data.
[23:00:51] ERROR: Vina exited with exit code = 1
VINA Error:

Parse error on line 34 in file ".\ZINC00121960.pdbqt": Atom 26 has not been found in this branch

23:00:51 (3504): called boinc_finish

</stderr_txt>
]]>
[Feb 26, 2012 12:20:33 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
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Re: New Beta test Started Jan 30, 2012

Work unit
BETA_ SN2S_ A37114_ 0000000_ 0308_ 0--

edit: 2 work units with identical errors

Begins:
<core_client_version>7.0.12</core_client_version>
<![CDATA[
<message>
- exit code 195 (0xc3)
</message>
<stderr_txt>
INFO: No state to restore. Start from the beginning.
[11:06:55] Number of tasks = 120
[11:06:55] Starting task 0,CPU time is 0.000000.
[11:06:55] ./ZINC00107289.pdbqt size = 25 4 ../../projects/www.worldcommunitygrid.org/beta14.target_A37114.pdbqt size = 37 0
[11:17:01] Vina exited normal 0.
[11:17:01] Finished task #0 cpu time used 603.515625
[11:17:01] Starting task 1,CPU time is 603.515625.
[11:17:01] ./ZINC00107289.pdbqt size = 25 4 ../../projects/www.worldcommunitygrid.org/beta14.target_A37114.pdbqt size = 37 0

continues until

[22:45:59] Vina exited normal 0.
[22:45:59] Finished task #111 cpu time used 594.359375
[22:45:59] Starting task 112,CPU time is 41550.484375.
[22:45:59] ./ZINC00107583.pdbqt size = 21 3 ../../projects/www.worldcommunitygrid.org/beta14.target_A37114.pdbqt size = 37 0
[22:46:00] ERROR: Vina exited with exit code = 1
VINA Error:

Parse error on line 33 in file ".\ZINC00107583.pdbqt": Atom 22 has not been found in this branch

Retrying task.
[22:46:02] Starting task 112,CPU time is 41550.484375.
[22:46:02] ./ZINC00107583.pdbqt size = 21 3 ../../projects/www.worldcommunitygrid.org/beta14.target_A37114.pdbqt size = 37 0
Unable to update graphics data.
[22:46:03] ERROR: Vina exited with exit code = 1
VINA Error:

Parse error on line 33 in file ".\ZINC00107583.pdbqt": Atom 22 has not been found in this branch

22:46:03 (3168): called boinc_finish

</stderr_txt>
]]>
----------------------------------------
[Edit 1 times, last edit by Former Member at Feb 27, 2012 5:05:44 PM]
[Feb 27, 2012 3:44:26 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
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Re: New Beta test Started Jan 30, 2012

It looks like the hard stop comes after 7 runs for beta WUs. Guess that's reasonable for testing.

I got another one, too: BETA_SN2S_A37114_0000001_0185. This one's giving:

Parse error on line 42 in file ".\ZINC00204230.pdbqt": Atom 28 has not been found in this branch

in task 60 of 84.

So it looks like there are either some bad input files or some situations that aren't being properly coped with. We've seen not dissimilar situations in other projects where the validator has been tweaked to give credit for this kind of error where it's the science that's wrong and not the cruncher's machine. I trust that the same thing will happen in SN2S production.
[Feb 29, 2012 2:46:50 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
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Re: New Beta test Started Jan 30, 2012

production already started last week. been good going so far......
[Feb 29, 2012 3:38:21 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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