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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Paul, that Switch Application trick does not work anymore [since longer in fact, about from v6], at the very least when you only have WCG. The only way to force [I know] is up the MinB value to greater than half the shortest deadline, meaning if you have a MinB of 2 days, tasks with <=4 days deadline jump ahead, unless you've got too many. Then processing goes by Earliest Deadline First.
[Dec 11, 2013 3:28:00 PM]   Link   Report threatening or abusive post: please login first  Go to top 
MStenholm
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Paul, that Switch Application trick does not work anymore [since longer in fact, about from v6], at the very least when you only have WCG. The only way to force [I know] is up the MinB value to greater than half the shortest deadline, meaning if you have a MinB of 2 days, tasks with <=4 days deadline jump ahead, unless you've got too many. Then processing goes by Earliest Deadline First.


That worked smile Thank you
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[Dec 11, 2013 3:55:25 PM]   Link   Report threatening or abusive post: please login first  Go to top 
XSmeagolX
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Wondering about this WU, running for 1 day now..

Infos:

World Community Grid 7.27 Beta - Mapping Cancer Markers BETA_MCM1_0000218_3215_1 01d,02:26:05 (01d,01:48:50) 97,65 99,599 00:06:19 14.12.2013 15:58:52 Aktiv [158] 00:06:13

Computer: MH1
Projekt World Community Grid

Name BETA_MCM1_0000218_3215_1

Anwendung Beta - Mapping Cancer Markers 7.27
Arbeitspaketname BETA_MCM1_0000218_3215
Status Aktiv
Erhalten 10.12.2013 15:58:45
Deadline 14.12.2013 15:58:52
Geschätzte Anwendungsgeschwindigkeit 2,98 GFLOPs/sec
Geschätzte Arbeitspaketgröße 49.301 GFLOPs
CPU-Zeit beim letzten Checkpoint 01d,01:42:36
CPU-Zeit 01d,01:50:30
Vergangene Zeit 01d,02:27:45
Geschätzte verbleibende Zeit 00:04:48
Fortschritt 99,697%
Größe des virtuellen Speichers 99,52 MB
Größe des Arbeitspakets im Speicher 61,25 MB
Verzeichnis slots/9
Prozess-ID 11752
----------------------------------------
WCG-Team Captain of Team SETI.Germany

(official Partner of World Community Grid)

[Dec 11, 2013 5:32:05 PM]   Link   Report threatening or abusive post: please login first  Go to top 
cowtipperbs
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Not a good day 6 beta Invalid . Do you want me to post each stderr_txt? Also have 8 non beta Invalid
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[Dec 11, 2013 6:29:10 PM]   Link   Report threatening or abusive post: please login first  Go to top 
littlepeaks
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

I got one of them thar beta tests yesterday. In the middle of it, I shut down BOINC, installed a Windows Update, and rebooted the PC. Got a valid -- the WU was kind of long 13 hours for me and about 19 hours for my wingman.
[Dec 11, 2013 6:49:40 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

On one device one is now into the..., no it finished:

BETA_MCM1_0000218_3216_0 23:58:09 (22:23:42) 12/11/2013 7:12:44 PM 12/11/2013 7:16:44 PM 93.43 Reported: OK Lapsed-01 85.35 MB 42.22 MB

22.4 hours, but chance was, neither 2 restarted, no wonder they were validated... no regressions.

BETA_ MCM1_ 0000218_ 3216_ 1-- 727 Valid 12/10/13 14:58:56 12/11/13 09:36:57 7.71 231.2 / 266.6
BETA_ MCM1_ 0000218_ 3216_ 0-- 727 Valid 12/10/13 14:58:52 12/11/13 18:13:45 22.40 302.0 / 266.6

Speed differential between the two was factor 3 (mine is the Centrino duo mobile model 2006, and W7-32)
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CandymanWCG
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

4 WUs I have suspended/resumed several times, all on a quad machine with LAIM ON. 3 of them have been deemed invalid while the wingman's got validated. A 4th is Pending Verification and I expect it to be marked invalid too. Here they are:
BETA_ MCM1_ 0000144_ 8316_ 0--
BETA_ MCM1_ 0000144_ 8888_ 0--
BETA_ MCM1_ 0000144_ 6693_ 0--

BETA_ MCM1_ 0000144_ 3134_ 1--

Oh, right, system information:
Win 7 x64 Ultimate
AMD Phenom B50 x4 @3.1GHz (stock)
RAMDisk 4.2.1.0 - 8GB partition
Boinc 7.2.33 x64


Yep, I was right: 4th one was invalid too. In the meantime the same machine completed 4 more WUs that were validated. I really couldn't say what went wrong. Hope the techs will be able to figure it out.
----------------------------------------
Knowledge is limited. Imagination encircles the world! - Albert Einstein



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DSL Freak
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

I finished 11 wu, 2 of them were rebooted and the rest were suspended with LAIM off. 9 of them came back valid, 1 is still pending validation and the other one was pending verification then when it validated it became invalid.

Here is the invalid one:


Result Log

Result Name: BETA_ MCM1_ 0000144_ 4956_ 2--
<core_client_version>6.10.58</core_client_version>
<![CDATA[
<stderr_txt>
Commandline = projects/www.worldcommunitygrid.org/wcgrid_beta17_7.27_windows_intelx86 -SettingsFile MCM1_0000144_4956.txt -DatabaseFile dataset-17_72_SDG_v1.txt
Settings File
DateOfDesign = 11/08/2013
Designer = PMCC_OCI
WorkOrderID = 0000144_4956
DatasetID = 17_72_SDG_v1
NumberOfGenesInStartingSignature = 16
NumberOfGenesInSignatureMin = 10
NumberOfGenesInSignatureMax = 20
GroupVectorValues = {A}{B}{C}{D}{E}{F}
ExplicitStartingGeneSignatures = A B D F
StartingGeneSignatureAlgorithm = randomFixedLengthSearch
SearchAlgorithmNumberToCreate = 7738
SearchAlgorithmSequentialStartPosition = 5
RunPermutationAlgorithm = 0
PermutationGroups = A
PermutationGroupsForReplacement = G
PermutationAlgorithm = replaceFromRandomlyToRandomlyGreedy
PermutationsNumIterations = 7738
OptimizationAlgorithmFrequency = 0 0 1
FBeta = 1.5
SimAnnealIMax = 20000
SimAnnealAlpha = 0.9996
NReps = 10
TrainFrac = 0.7
NFolds = 10
VMethod = NFCV
ModelType = SVM
FitnessFn = 0
MinFitness = -1
SvmArgs = "-v 0 -c 0.01 -t 1 -d 3 -r 0"
SvmLearnLimit = 500000
RSeed = 344956


[17:15:43] Initializing
wcg_learn_limit = 500000
[17:15:52] Running
[17:15:52] EvaluateFitnessOfStartingGeneSignatures 7738
Commandline = projects/www.worldcommunitygrid.org/wcgrid_beta17_7.27_windows_intelx86 -SettingsFile MCM1_0000144_4956.txt -DatabaseFile dataset-17_72_SDG_v1.txt
[18:46:36] Initializing
wcg_learn_limit = 500000
[18:46:47] Running
[18:46:47] EvaluateFitnessOfStartingGeneSignatures 7738
Commandline = projects/www.worldcommunitygrid.org/wcgrid_beta17_7.27_windows_intelx86 -SettingsFile MCM1_0000144_4956.txt -DatabaseFile dataset-17_72_SDG_v1.txt
[19:42:44] Initializing
wcg_learn_limit = 500000
[19:42:53] Running
[19:42:53] EvaluateFitnessOfStartingGeneSignatures 7738
[21:11:04] Writing final output
[21:11:05] Closing Output Stream
[21:11:05] Cleaning up
Result.out = 1627661.000000
Run complete, CPU time: 13340.410122
21:11:05 (4172): called boinc_finish

</stderr_txt>
]]>
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Crunchin' for a cure!
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[Edit 3 times, last edit by DSL Freak at Dec 11, 2013 8:31:52 PM]
[Dec 11, 2013 7:54:09 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

Is the Result.out = 1627661.000000 different to the two valid of that last result that went invalid for you?
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Former Member
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Re: Mapping Cancer Markers Beta Test - Version 7.27 [ Issues Thread ]

hi - will anymore tasks be sent out for this test?
[Dec 11, 2013 8:06:16 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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