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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

I have all 4 beta WUs showing an ERROR result for one computer. WUs are still in progress for another computer and I have successful completion for WUs which have run on my laptop. Do I need to be concerned? For one of the error WUs, the result log follows:

Result Log

Result Name: BETA_ SN2S_ ABE97928_ 0000030_ 0015_ 1--
<core_client_version>6.10.18</core_client_version>
<![CDATA[
<message>
- exit code -1073741790 (0xc0000022)
</message>
]]>
[May 27, 2012 4:35:41 PM]   Link   Report threatening or abusive post: please login first  Go to top 
gb009761
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

dkt, on the computer which all the WU's have errored, check your AV software, as you may find (as I did), that the program has been quarantened - thus, not allowing the WU's to process normally. If you do find this, then manually 'Okay them' so as to allow them to run in future.
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[May 27, 2012 4:42:26 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Bearcat
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

Received 32 with no problems. Couldn't babysit them to shut the PC down in between the other wu's crunching. Only using MSE.
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Crunching for humanity since 2007!

[May 27, 2012 9:47:37 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

Received 4 of those, I did shut down normally Windows several times, no issues, already validated.
[May 27, 2012 10:02:47 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Crystal Pellet
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

Workunit Status

Project Name: Beta - Say No to Schistosoma
Created: 05/27/2012 15:06:09
Name: BETA_SN2S_smp005470_0000002_0347
Minimum Quorum: 2
Replication: 2

Result Name App Version Number Status Sent Time Time Due / Return Time CPU Time (hours) Claimed/ Granted BOINC Credit
BETA_ SN2S_ smp005470_ 0000002_ 0347_ 3-- - In Progress 28/05/12 04:59:31 29/05/12 19:23:31 0.00 0.0 / 0.0 <-- mine
BETA_ SN2S_ smp005470_ 0000002_ 0347_ 2-- 620 Error 27/05/12 16:50:17 28/05/12 04:39:55 1.39 38.0 / 0.0 <-- mine
BETA_ SN2S_ smp005470_ 0000002_ 0347_ 1-- - In Progress 27/05/12 15:06:32 29/05/12 12:23:06 0.00 0.0 / 0.0
BETA_ SN2S_ smp005470_ 0000002_ 0347_ 0-- 620 Error 27/05/12 15:06:12 27/05/12 16:50:10 1.67 35.9 / 0.0

Both errors with 'exit code 195' ended with:

[17:48:55] Vina exited normal 0.
[17:48:55] Finished task #35 cpu time used 190.687500
[17:48:55] Starting task 36,CPU time is 6019.015625.
[17:48:55] ./ZINC00085667.pdbqt size = 19 2 ../../projects/www.worldcommunitygrid.org/beta14.target_smp005470.pdbqt size = 600 0
[17:48:56] ERROR: Vina exited with exit code = 1
VINA Error:

Parse error on line 28 in file ".\ZINC00085667.pdbqt": Atom 20 has not been found in this branch

Retrying task.
[17:49:01] Starting task 36,CPU time is 6019.015625.
[17:49:01] ./ZINC00085667.pdbqt size = 19 2 ../../projects/www.worldcommunitygrid.org/beta14.target_smp005470.pdbqt size = 600 0
Unable to update graphics data.
[17:49:02] ERROR: Vina exited with exit code = 1
VINA Error:

Parse error on line 28 in file ".\ZINC00085667.pdbqt": Atom 20 has not been found in this branch

17:49:02 (4984): called boinc_finish

</stderr_txt>
]]>
----------------------------------------

[May 28, 2012 6:32:00 AM]   Link   Report threatening or abusive post: please login first  Go to top 
Crystal Pellet
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

BETA_ SN2S_ smp005470_ 0000002_ 0347_ 3-- - In Progress 28/05/12 04:59:31 29/05/12 19:23:31 0.00 0.0 / 0.0 <-- mine
Mine in progress one ended with the same error

From another task 6 wingmen returned an error, 1 in progress, because of
Parse error on line 38 in file ".\ZINC00058183.pdbqt": Atom 23 has not been found in this branch
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[May 28, 2012 1:46:58 PM]   Link   Report threatening or abusive post: please login first  Go to top 
uplinger
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

Work units with the Atom ## does not exist or is not found are issues with the ligands. These are new ligands that I pulled for testing, they had not gone through a pre screening thus causing the issues. This type of error is found before we send them into production with a quick test of the ligands on the backend.

So, in short, these errors are known and are nothing to worry about as in production they are handled and not sent out to the grid.

Thanks,
-Uplinger
[May 28, 2012 5:43:23 PM]   Link   Report threatening or abusive post: please login first  Go to top 
chauyan@poverty
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

ive found a log "No tasks are available for Say No to Schistosoma".
scheduler died, or beta test failed?
[May 28, 2012 9:35:47 PM]   Link   Report threatening or abusive post: please login first  Go to top 
sk..
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

!
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[Edit 1 times, last edit by skgiven at Jul 18, 2012 8:59:55 PM]
[May 28, 2012 10:59:49 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Pete Broad
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Re: Beta test for Say No to Schistosoma (May 24, 2012) Issues Thread

Sadly my one of my computers broke down (will need a new motherboard)with this one in progress.

BETA_SN2S_ABE97928_0000031_0648

Pete
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[May 28, 2012 11:04:53 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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