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vepaul
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Belgium
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Re: Mapping Cancer Markers - Problems Thread

26/01/2014 20:25:02 World Community Grid Starting task MCM1_0001737_3184_2 using mcm1 version 728
26/01/2014 20:25:09 World Community Grid Computation for task MCM1_0001737_3184_2 finished
26/01/2014 20:25:09 World Community Grid Output file MCM1_0001737_3184_2_0 for task MCM1_0001737_3184_2 absent
26/01/2014 20:25:09 World Community Grid Starting MCM1_0001737_2729_2
26/01/2014 20:25:09 World Community Grid Starting task MCM1_0001737_2729_2 using mcm1 version 728
26/01/2014 20:25:17 World Community Grid Computation for task MCM1_0001737_2729_2 finished
26/01/2014 20:25:17 World Community Grid Output file MCM1_0001737_2729_2_0 for task MCM1_0001737_2729_2 absent
26/01/2014 20:28:01 World Community Grid Sending scheduler request: To fetch work.
26/01/2014 20:28:01 World Community Grid Reporting 2 completed tasks, requesting new tasks for GPU
26/01/2014 20:28:04 World Community Grid Scheduler request completed: got 0 new tasks
26/01/2014 20:28:04 World Community Grid Message from server: No tasks sent
26/01/2014 20:28:04 World Community Grid Message from server: No tasks are available for Mapping Cancer Markers
26/01/2014 20:28:04 World Community Grid Message from server: No tasks are available for The Clean Energy Project - Phase 2
26/01/2014 20:28:04 World Community Grid Message from server: No tasks are available for FightAIDS@Home - Vina
26/01/2014 20:28:04 World Community Grid Message from server: No tasks are available for FightAIDS@Home - AutoDock
26/01/2014 20:28:04 World Community Grid Message from server: Project has no tasks available
26/01/2014 20:31:06 World Community Grid Sending scheduler request: To fetch work.
26/01/2014 20:31:06 World Community Grid Requesting new tasks for GPU
26/01/2014 20:31:08 World Community Grid Scheduler request completed: got 0 new tasks
26/01/2014 20:31:08 World Community Grid Message from server: No tasks sent
26/01/2014 20:31:08 World Community Grid Message from server: No tasks are available for Mapping Cancer Markers
26/01/2014 20:31:08 World Community Grid Message from server: No tasks are available for The Clean Energy Project - Phase 2
26/01/2014 20:31:08 World Community Grid Message from server: No tasks are available for FightAIDS@Home - Vina
26/01/2014 20:31:08 World Community Grid Message from server: No tasks are available for FightAIDS@Home - AutoDock
26/01/2014 20:31:08 World Community Grid Message from server: Project has no tasks available
[Jan 26, 2014 7:36:45 PM]   Link   Report threatening or abusive post: please login first  Go to top 
vepaul
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Belgium
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Re: Mapping Cancer Markers - Problems Thread

Above what is on my messages box, however FAAH is running smoothly. MCM stops after a few seconds.

Something wrong with the way of sending ?
Paul
[Jan 26, 2014 7:39:17 PM]   Link   Report threatening or abusive post: please login first  Go to top 
roundup
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Switzerland
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Re: Mapping Cancer Markers - Problems Thread

I got many errors during recent two days on a Linux64 machine.

Here are two examples:
<core_client_version>7.2.7</core_client_version>
<![CDATA[
<message>
process exited with code 193 (0xc1, -63)
</message>
<stderr_txt>
Commandline = ../../projects/www.worldcommunitygrid.org/wcgrid_mcm1_7.28_i686-pc-linux-gnu -SettingsFile MCM1_0001740_2299.txt -DatabaseFile dataset-17_72_SDG_v1.txt
Settings File
DateOfDesign = 11/07/2013
Designer = PMCC_OCI
WorkOrderID = 1740_2299
DatasetID = 17_72_SDG_v1
NumberOfGenesInStartingSignature = 11
NumberOfGenesInSignatureMin = 10
NumberOfGenesInSignatureMax = 20
GroupVectorValues = {A}{B}{C}{D}{E}{F}
ExplicitStartingGeneSignatures = A B D F
StartingGeneSignatureAlgorithm = randomFixedLengthSearch
SearchAlgorithmNumberToCreate = 1
SearchAlgorithmSequentialStartPosition = 5
RunPermutationAlgorithm = 1
PermutationGroups = A
PermutationGroupsForReplacement = G
PermutationAlgorithm = replaceFromRandomlyToRandomlyGreedy
PermutationsNumIterations = 31134
OptimizationAlgorithmFrequency = 0 0 1
FBeta = 1.5
SimAnnealIMax = 20000
SimAnnealAlpha = 0.9996
NReps = 9
TrainFrac = 1.0
NFolds = 10
VMethod = OOB
ModelType = SVM
FitnessFn = 0
MinFitness = -1
SvmArgs = "-v 0 -c 0.01 -t 1 -d 3 -r 0"
SvmLearnLimit = 500000
RSeed = 7979472299


[20:34:54] Initializing
WU Interpret Error 1
terminate called after throwing an instance of 'Exception'
SIGABRT: abort called
Stack trace (16 frames):
[0x80d951d]
[0xf7702400]
[0xf7702430]
[0x8157433]
[0x8141327]
[0x813f9c6]
[0x813fa03]
[0x813f8f2]
[0x80af1b0]
[0x80afb2f]
[0x808cbeb]
[0x8082e1d]
[0x8082f87]
[0x8067e4e]
[0x814ea12]
[0x8048201]

Exiting...

</stderr_txt>
]]>

SECOND EXAMPLE:

<core_client_version>7.2.7</core_client_version>
<![CDATA[
<message>
process exited with code 193 (0xc1, -63)
</message>
<stderr_txt>
Commandline = ../../projects/www.worldcommunitygrid.org/wcgrid_mcm1_7.28_x86_64-pc-linux-gnu -SettingsFile MCM1_0001740_2207.txt -DatabaseFile dataset-17_72_SDG_v1.txt
Settings File
DateOfDesign = 11/07/2013
Designer = PMCC_OCI
WorkOrderID = 1740_2207
DatasetID = 17_72_SDG_v1
NumberOfGenesInStartingSignature = 11
NumberOfGenesInSignatureMin = 10
NumberOfGenesInSignatureMax = 20
GroupVectorValues = {A}{B}{C}{D}{E}{F}
ExplicitStartingGeneSignatures = A B D F
StartingGeneSignatureAlgorithm = randomFixedLengthSearch
SearchAlgorithmNumberToCreate = 1
SearchAlgorithmSequentialStartPosition = 5
RunPermutationAlgorithm = 1
PermutationGroups = A
PermutationGroupsForReplacement = G
PermutationAlgorithm = replaceFromRandomlyToRandomlyGreedy
PermutationsNumIterations = 31134
OptimizationAlgorithmFrequency = 0 0 1
FBeta = 1.5
SimAnnealIMax = 20000
SimAnnealAlpha = 0.9996
NReps = 9
TrainFrac = 1.0
NFolds = 10
VMethod = OOB
ModelType = SVM
FitnessFn = 0
MinFitness = -1
SvmArgs = "-v 0 -c 0.01 -t 1 -d 3 -r 0"
SvmLearnLimit = 500000
RSeed = 7979472207


[20:34:55] Initializing
WU Interpret Error 1
terminate called after throwing an instance of 'Exception'
SIGABRT: abort called
Stack trace (15 frames):
[0x49895d]
[0x47fe10]
[0x47fcdb]
[0x51fe05]
[0x50313d]
[0x501106]
[0x501133]
[0x5003ce]
[0x470299]
[0x44a231]
[0x441a98]
[0x441c42]
[0x42584f]
[0x5172bb]
[0x400449]

Exiting...

</stderr_txt>
]]>

EDIT: This machine is not oc'ed.
----------------------------------------
[Edit 1 times, last edit by roundup at Jan 26, 2014 7:44:47 PM]
[Jan 26, 2014 7:42:59 PM]   Link   Report threatening or abusive post: please login first  Go to top 
jonnieb-uk
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England
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Re: Mapping Cancer Markers - Problems Thread

There is a problem with MCM1 WUs at this time affecting Batches # 1733- 1740 sad

See here 1733 Comp Errors - Missing Output Files..
----------------------------------------

To Join follow this link: Join the UK Team All Welcome! UK Team thread
[Jan 26, 2014 7:52:36 PM]   Link   Report threatening or abusive post: please login first  Go to top 
TKH
Former World Community Grid Admin
USA
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Re: Mapping Cancer Markers - Problems Thread

Hello All,

The team is working on identifying the issue . Thank you in advance for your patience.

Tedi
[Jan 27, 2014 2:32:02 PM]   Link   Report threatening or abusive post: please login first  Go to top 
pcwr
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Re: Mapping Cancer Markers - Problems Thread

I take it this is why there are no new MCM1 WUs available.


Patrick
----------------------------------------

[Jan 27, 2014 4:40:28 PM]   Link   Report threatening or abusive post: please login first  Go to top 
jonnieb-uk
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Re: Mapping Cancer Markers - Problems Thread

Patrick

Temporary Stop for Mapping Cancer Markers Sun Jan 26, 2014 10:47:00 PM
----------------------------------------

To Join follow this link: Join the UK Team All Welcome! UK Team thread
[Jan 27, 2014 5:04:45 PM]   Link   Report threatening or abusive post: please login first  Go to top 
TKH
Former World Community Grid Admin
USA
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Re: Mapping Cancer Markers - Problems Thread

Hello All,

This issue with the work unit errors has been resolved . Thank you for your patience.

Tedi
[Jan 28, 2014 1:40:44 PM]   Link   Report threatening or abusive post: please login first  Go to top 
yojimbo197
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Re: Mapping Cancer Markers - Problems Thread

So does this mean we can trust all WU's over 1730? or 1740?
----------------------------------------

[Jan 29, 2014 12:27:13 AM]   Link   Report threatening or abusive post: please login first  Go to top 
Sgt.Joe
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Re: Mapping Cancer Markers - Problems Thread

Based on my experience - Yes.
Cheers
----------------------------------------
Sgt. Joe
*Minnesota Crunchers*
[Jan 29, 2014 3:54:06 AM]   Link   Report threatening or abusive post: please login first  Go to top 
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