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World Community Grid Forums
Category: Beta Testing
Forum: Beta Test Support Forum
Thread: Discovering Dengue Drugs - Together Phase 2 Beta Type A Dec 16 2009 |
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Thread Status: Active Total posts in this thread: 130
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uplinger
Former World Community Grid Tech Joined: May 23, 2005 Post Count: 3952 Status: Offline Project Badges: 
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Jean, I just checked my machines, I'm actually a wingman of yours on that a046 work unit. and it is 25% done after 17 hours on my slower machines...
-Uplinger |
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boulmontjj
Senior Cruncher France Joined: Nov 17, 2004 Post Count: 317 Status: Offline Project Badges: 
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14 cores running on 5 machines at the time there were sent and 0 béta received !
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Dataman
Ace Cruncher Joined: Nov 16, 2004 Post Count: 4865 Status: Offline Project Badges: 
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Good morning. All 14 of my Beta’s are still running well. I did notice that one of my wingmen had an error after 8.83 hours as follows:
----------------------------------------Project Name: Beta - Discovering Dengue Drugs - Together - Phase 2 Created: 12/16/09 Name: BETA_erlc_a077_ps0000 Minimum Quorum: 2 Replication: 3 Result Name App Version Number Status Sent Time Time Due / Return Time CPU Time (hours) Claimed/ Granted BOINC Credit BETA_ erlc_ a077_ ps0000_ 3-- - In Progress 12/17/09 11:37:11 12/22/09 08:27:46 0.00 0.0 / 0.0 BETA_ erlc_ a077_ ps0000_ 1-- - In Progress 12/16/09 23:10:01 12/26/09 23:10:01 0.00 0.0 / 0.0 BETA_ erlc_ a077_ ps0000_ 0-- 612 Error 12/16/09 23:10:00 12/17/09 11:37:08 8.83 232.4 / 0.0 BETA_ erlc_ a077_ ps0000_ 2-- - In Progress 12/16/09 23:09:56 12/26/09 23:09:56 0.00 0.0 / 0.0 It appears to be an access violation: - Unhandled Exception Record - Reason: Access Violation (0xc0000005) at address 0x00765AAB read attempt to address 0x56C2DDA0 Engaging BOINC Windows Runtime Debugger... Mine is still running well at 15:30 hours and 34% complete as well as the other wingmen.   |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Interim Report: BETA_ erlc_ a063_ ps0000_ 1--
So far so good, 18:45 Wall Clock 34.92% Completed. All 3 copies show "In Progress" (no errors). Concurrently running HFCC and Rice on other 3 cores and a GPUGrid on the GTS250. AMD Phenom II 3.0 GHz/4 GB ram Fedora 11 Client 6.10.17 x86_64 Am I allowed to be on this pool? I'm guessing no... Anyways, to let everyone know, we will wait for all of the type A work units to complete first. Then, as we will in production, return the results from the type A work units to the researchers. They will check them and create the type B work units from them for us to download and distribute. Same step happens with the type B to C exchange. Darn, I guess that rules out the pool  Thanks for the info. |
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JmBoullier
Former Community Advisor Normandy - France Joined: Jan 26, 2007 Post Count: 3715 Status: Offline Project Badges: 
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There is a major loop within these work units that has 50 passes, and we are not able to restart mid loop at this point. That's what I was thinking of when I wrote my post.Depending on how the program has been designed and on how much you may change it, eliminating this constraint can vary from rather easy to nearly impossible. I'm actually a wingman of yours on that a046 work unit. and it is 25% done after 17 hours on my slower machines... Nice to meet you! I have passed 18 % after 7:09:25 CPU time and things are going fine, with a checkpoint about every 45 minutes. Total CPU time might be something between 37 and 39 hours finally. We'll see. Jean. |
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X-Files 27
Senior Cruncher Canada Joined: May 21, 2007 Post Count: 391 Status: Offline Project Badges: 
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update: 15hrs @ 1% complete and no checkpoint
---------------------------------------- i'll suspend now (with LAIM turned on) and see what will happen.   |
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uplinger
Former World Community Grid Tech Joined: May 23, 2005 Post Count: 3952 Status: Offline Project Badges:
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X-Files, please go into your slots/0 directory and copy and paste the last 100 lines of result.out file in that directory here. Also, can you post what is in the stderr.txt file in that directory?
Thanks, -Uplinger |
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uplinger
Former World Community Grid Tech Joined: May 23, 2005 Post Count: 3952 Status: Offline Project Badges:
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result.out should look something like this...
UPDECI: Nonbond update at step 3200 UPDECI: Nonbond update at step 3300 UPDECI: Nonbond update at step 3400 UPDECI: Nonbond update at step 3500 UPDECI: Nonbond update at step 3600 UPDECI: Nonbond update at step 3700 UPDECI: Nonbond update at step 3800 UPDECI: Nonbond update at step 3900 DYNA> 4000 8.00000 -2103.20883 2123.19618 -4226.40501 301.30878 DYNA PROP> 17.90573 -2084.60244 2178.43388 18.60639 2167.11114 DYNA INTERN> 372.25635 934.95156 112.01037 643.63099 66.11814 DYNA CROSS> -162.57195 DYNA EXTERN> -510.99633 -5112.80776 0.00000 0.00000 0.00000 DYNA PBEQ> 0.00000 0.00000 0.00000 -568.99638 DYNA PRESS> -353.72840 -1091.01236 0.00000 0.00000 0.00000 ---------- --------- --------- --------- --------- --------- DYNAMC> Averages for the last 1000 steps: AVER DYN: Step Time TOTEner TOTKe ENERgy TEMPerature AVER PROP: GRMS HFCTote HFCKe EHFCor VIRKe AVER INTERN: BONDs ANGLes UREY-b DIHEdrals IMPRopers AVER CROSS: CMAPs AVER EXTERN: VDWaals ELEC HBONds ASP USER AVER PBEQ: PBnp PBelec GBEnr GSBP AVER PRESS: VIRE VIRI PRESSE PRESSI VOLUme ---------- --------- --------- --------- --------- --------- AVER> 1000 8.00000 -2057.65453 2156.00003 -4213.65456 305.96406 AVER PROP> 17.92125 -2039.29373 2211.04200 18.36080 1921.78555 AVER INTERN> 363.18688 953.61500 112.06897 654.43045 64.84686 AVER CROSS> -169.40280 AVER EXTERN> -518.55272 -5103.98387 0.00000 0.00000 0.00000 AVER PBEQ> 0.00000 0.00000 0.00000 -569.86334 AVER PRESS> -252.10307 -1029.08730 0.00000 0.00000 0.00000 ---------- --------- --------- --------- --------- --------- DYNAMC> RMS fluctuations for the last 1000 steps: FLUC> 1000 8.00000 49.78989 35.67776 31.04984 5.06313 FLUC PROP> 0.27797 50.09829 36.07062 1.83503 1253.71404 FLUC INTERN> 15.74031 23.06225 4.76077 9.58558 5.30811 FLUC CROSS> 5.19069 FLUC EXTERN> 24.04665 27.22222 0.00000 0.00000 0.00000 FLUC PBEQ> 0.00000 0.00000 0.00000 4.95227 FLUC PRESS> 812.62554 353.91923 0.00000 0.00000 0.00000 ---------- --------- --------- --------- --------- --------- DYNAMC> Averages for the last 4000 steps: LAVE> 4000 8.00000 -2052.77633 2141.79804 -4194.57437 303.94862 LAVE PROP> 17.88464 -2034.60430 2196.28111 18.17202 1896.01014 LAVE INTERN> 361.96295 947.15760 110.91062 652.65104 63.52176 LAVE CROSS> -168.55470 LAVE EXTERN> -530.31885 -5068.08273 0.00000 0.00000 0.00000 LAVE PBEQ> 0.00000 0.00000 0.00000 -563.82207 LAVE PRESS> -213.35654 -1050.65022 0.00000 0.00000 0.00000 ---------- --------- --------- --------- --------- --------- DYNAMC> RMS fluctuations for the last 4000 steps: LFLC> 4000 8.00000 50.02150 34.69968 40.86284 4.92433 LFLC PROP> 0.24895 50.20311 34.80203 1.83324 1180.70724 LFLC INTERN> 15.66991 21.38687 4.44167 11.12535 5.56293 LFLC CROSS> 5.31323 LFLC EXTERN> 24.68744 45.13369 0.00000 0.00000 0.00000 LFLC PBEQ> 0.00000 0.00000 0.00000 8.04378 LFLC PRESS> 776.24063 343.72819 0.00000 0.00000 0.00000 ---------- --------- --------- --------- --------- --------- DRIFT/STEP (LAST-TOTAL): 4.43839341E-02 -9.34651893E-03 E AT STEP 0 : -2061.5079 -2015.9066 CORR. COEFFICIENT : 0.25574789 -0.21497533 UPDECI: Nonbond update at step 4000 UPDECI: Nonbond update at step 4100 UPDECI: Nonbond update at step 4200 UPDECI: Nonbond update at step 4300 stderr.txt should look like this... wcgStepsDone = 3700 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.534800 wcgStepsDone = 3800 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.535200 wcgStepsDone = 3900 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.535600 wcgStepsDone = 4000 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.536000 wcgStepsDone = 4100 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.536400 wcgStepsDone = 4200 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.536800 wcgStepsDone = 4300 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.537200 wcgStepsDone = 4400 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.537600 wcgStepsDone = 4500 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.538000 wcgStepsDone = 4600 wcgSteps1 = 5000 wcgCyclesDone = 26 wcgCycles = 50 pctComplete = 0.538400 -Uplinger |
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X-Files 27
Senior Cruncher Canada Joined: May 21, 2007 Post Count: 391 Status: Offline Project Badges:
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result.out
---------------------------------------- TOTAL OF 116 WARNINGS FROM ECMAP EPHIFS: WARNING. dihedral 157 is almost linear. derivatives may be affected for atoms: 62 64 65 73 EPHIFS: WARNING. dihedral 159 is almost linear. derivatives may be affected for atoms: 62 64 68 70 EPHIFS: WARNING. dihedral 163 is almost linear. derivatives may be affected for atoms: 64 65 73 70 EPHIFS: WARNING. dihedral 164 is almost linear. derivatives may be affected for atoms: 64 65 73 74 EPHIFS: WARNING. dihedral 165 is almost linear. derivatives may be affected for atoms: 64 65 73 75 EPHIFS> Total of 4840 WARNINGs issued. EIPHIFS: WARNING. dihedral 12 is almost linear. derivatives may be affected for atoms: 109 94 111 110 EIPHIFS: WARNING. dihedral 13 is almost linear. derivatives may be affected for atoms: 111 109 113 112 EIPHIFS: WARNING. dihedral 14 is almost linear. derivatives may be affected for atoms: 128 113 130 129 EIPHIFS: WARNING. dihedral 15 is almost linear. derivatives may be affected for atoms: 130 128 132 131 EIPHIFS: WARNING. dihedral 16 is almost linear. derivatives may be affected for atoms: 149 132 151 150 EIPHIFS> Total of 282 WARNINGs issued. ECMAP: WARNING. dihedral 4 is almost linear. derivatives may be affected for atoms: 92 94 109 111 ECMAP: WARNING. dihedral 5 is almost linear. derivatives may be affected for atoms: 109 111 113 128 ECMAP: WARNING. dihedral 6 is almost linear. derivatives may be affected for atoms: 128 130 132 149 ECMAP: WARNING. dihedral 7 is almost linear. derivatives may be affected for atoms: 149 151 153 160 ECMAP: WARNING. dihedral 8 is almost linear. derivatives may be affected for atoms: 160 162 164 175 TOTAL OF 116 WARNINGS FROM ECMAP EPHIFS: WARNING. dihedral 157 is almost linear. derivatives may be affected for atoms: 62 64 65 73 EPHIFS: WARNING. dihedral 159 is almost linear. derivatives may be affected for atoms: 62 64 68 70 EPHIFS: WARNING. dihedral 163 is almost linear. derivatives may be affected for atoms: 64 65 73 70 EPHIFS: WARNING. dihedral 164 is almost linear. derivatives may be affected for atoms: 64 65 73 74 EPHIFS: WARNING. dihedral 165 is almost linear. derivatives may be affected for atoms: 64 65 73 75 EPHIFS> Total of 4840 WARNINGs issued. EIPHIFS: WARNING. dihedral 12 is almost linear. derivatives may be affected for atoms: 109 94 111 110 EIPHIFS: WARNING. dihedral 13 is almost linear. derivatives may be affected for atoms: 111 109 113 112 EIPHIFS: WARNING. dihedral 14 is almost linear. derivatives may be affected for atoms: 128 113 130 129 EIPHIFS: WARNING. dihedral 15 is almost linear. derivatives may be affected for atoms: 130 128 132 131 EIPHIFS: WARNING. dihedral 16 is almost linear. derivatives may be affected for atoms: 149 132 151 150 EIPHIFS> Total of 282 WARNINGs issued. ECMAP: WARNING. dihedral 4 is almost linear. derivatives may be affected for atoms: 92 94 109 111 ECMAP: WARNING. dihedral 5 is almost linear. derivatives may be affected for atoms: 109 111 113 128 ECMAP: WARNING. dihedral 6 is almost linear. derivatives may be affected for atoms: 128 130 132 149 ECMAP: WARNING. dihedral 7 is almost linear. derivatives may be affected for atoms: 149 151 153 160 ECMAP: WARNING. dihedral 8 is almost linear. derivatives may be affected for atoms: 160 162 164 175 TOTAL OF 116 WARNINGS FROM ECMAP EPHIFS: WARNING. dihedral 157 is almost linear. derivatives may be affected for atoms: 62 64 65 73 EPHIFS: WARNING. dihedral 159 is almost linear. derivatives may be affected for atoms: 62 64 68 70 EPHIFS: WARNING. dihedral 163 is almost linear. derivatives may be affected for atoms: 64 65 73 70 EPHIFS: WARNING. dihedral 164 is almost linear. derivatives may be affected for atoms: 64 65 73 74 EPHIFS: WARNING. dihedral 165 is almost linear. derivatives may be affected for atoms: 64 65 73 75 EPHIFS> Total of 4840 WARNINGs issued. EIPHIFS: WARNING. dihedral 12 is almost linear. derivatives may be affected for atoms: 109 94 111 110 EIPHIFS: WARNING. dihedral 13 is almost linear. derivatives may be affected for atoms: 111 109 113 112 EIPHIFS: WARNING. dihedral 14 is almost linear. derivatives may be affected for atoms: 128 113 130 129 EIPHIFS: WARNING. dihedral 15 is almost linear. derivatives may be affected for atoms: 130 128 132 131 EIPHIFS: WARNING. dihedral 16 is almost linear. derivatives may be affected for atoms: 149 132 151 150 EIPHIFS> Total of 282 WARNINGs issued. ECMAP: WARNING. dihedral 4 is almost linear. derivatives may be affected for atoms: 92 94 109 111 ECMAP: WARNING. dihedral 5 is almost linear. derivatives may be affected for atoms: 109 111 113 128 ECMAP: WARNING. dihedral 6 is almost linear. derivatives may be affected for atoms: 128 130 132 149 ECMAP: WARNING. dihedral 7 is almost linear. derivatives may be affected for atoms: 149 151 153 160 ECMAP: WARNING. dihedral 8 is almost linear. derivatives may be affected for atoms: 160 162 164 175 TOTAL OF 116 WARNINGS FROM ECMAP stderr.txt INFO: No state to restore. Start from the beginning. wcgStepsDone = 100 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.000400 wcgStepsDone = 200 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.000800 wcgStepsDone = 300 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.001200 wcgStepsDone = 400 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.001600 wcgStepsDone = 500 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.002000 wcgStepsDone = 600 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.002400 wcgStepsDone = 700 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.002800 wcgStepsDone = 800 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.003200 wcgStepsDone = 900 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.003600 wcgStepsDone = 1000 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.004000 wcgStepsDone = 1100 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.004400 wcgStepsDone = 1200 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.004800 wcgStepsDone = 1300 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.005200 wcgStepsDone = 1400 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.005600 wcgStepsDone = 1500 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.006000 wcgStepsDone = 1600 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.006400 wcgStepsDone = 1700 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.006800 wcgStepsDone = 1800 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.007200 wcgStepsDone = 1900 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.007600 wcgStepsDone = 2000 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.008000 wcgStepsDone = 2100 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.008400 wcgStepsDone = 2200 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.008800 wcgStepsDone = 2300 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.009200 wcgStepsDone = 2400 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.009600 wcgStepsDone = 2500 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.010000 wcgStepsDone = 2600 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.010400 wcgStepsDone = 2700 wcgSteps1 = 5000 wcgCyclesDone = 0 wcgCycles = 50 pctComplete = 0.010800 |
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uplinger
Former World Community Grid Tech Joined: May 23, 2005 Post Count: 3952 Status: Offline Project Badges:
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Hmm....I'm going to send this work unit to the researchers. to see if they know what may be happening here.
Thanks for the information...I'll let you know if it should be aborted. -Uplinger |
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