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Category: Active Research Forum: Mapping Cancer Markers Forum Thread: Welcome to Mapping Cancer Markers |
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Thread Status: Active Thread Type: Sticky Thread Total posts in this thread: 121
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Jurisica
World Community Grid Admin, Mapping Cancer Markers and Help Conquer Cancer Scientist Joined: Feb 28, 2007 Post Count: 87 Status: Offline Project Badges: |
Dear World Community Grid volunteers,
----------------------------------------We're excited to introduce you to our new project, Mapping Cancer Markers. Most cancers lack effective markers to detect disease early, to identify high risk patients (prognostic signatures), and to predict optimal treatment strategy (predictive signatures). The main challenge is learning from and using the enormous amounts of complex, molecular data from tumor samples. Many methods have been introduced to generate prognostic and predictive signatures from these data, but we lack systematic approaches to find all useful signatures, and to select the best one. Counter intuitively, good signatures comprise not only the most differential markers. Identifying these less differential markers - "the best supporting actors" - calls for novel, integrative approaches as current statistical and machine learning methods fail in this task. The Mapping Cancer Markers (MCM; http://www.cs.utoronto.ca/~juris/MCM.htm ) project aims to comprehensively and systematically discover clinically useful markers to help: 1. Detect cancer early, 2. Identify high-risk patients, and 3. Predict treatment response. To power this research, we rely on World Community Grid volunteers who donate their computers' spare capacity to carry out this extensive analysis. Finding all clinically useful markers would require processing thousands of patient samples and testing an astronomical number of marker combinations, which is not feasible even on World Community Grid. We developed approaches called heuristics to reduce the search space, enabling us to tackle this challenge. However, the success of MCM project is only enabled by World Community Grid with the computing resources donated by volunteers around the world. Considering the diversity of analyses and data, we will have large variation in runtimes and work unit duration. We will keep you updated on the progress and discoveries, and would be happy to answer any questions you may have about the project. We hope you will find our project interesting, and support its goals. With your participation, we will form the largest "cancer research team" in the world. [Edit 1 times, last edit by Jurisica at Nov 8, 2013 4:41:17 PM] |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
I cant wait for your project to start, & good luck with it!
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sartaonline
Advanced Cruncher USA Joined: Sep 24, 2013 Post Count: 96 Status: Offline Project Badges: |
Just saw this and am excited to start helping with this disease!
----------------------------------------I noticed also that while I have the box checked to auto add new projects that it did not add this project, so I manually checked it. |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Just got my 1st work units & have this project running on 2 machines now!
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Thargor
Veteran Cruncher UK Joined: Feb 3, 2012 Post Count: 1291 Status: Offline Project Badges: |
Have just updated all of my profiles to run solely this project (with overflow set to grab anything else if nothing else is available). Running a 2-day work-cache, it may take a while to get started, but my server-farm will get started on it soon enough!
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rilian
Veteran Cruncher Ukraine - we rule! Joined: Jun 17, 2007 Post Count: 1452 Status: Offline Project Badges: |
Great project - i'm in with my mini grid :)
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gb009761
Master Cruncher Scotland Joined: Apr 6, 2005 Post Count: 2977 Status: Offline Project Badges: |
Excellent - a new project to chew on
----------------------------------------Welcome Jurisica - here's hoping that this project exceeds your expectations, both in terms of results you're hoping to get from it, and the speed the data will be arriving in your labs. |
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Dataman
Ace Cruncher Joined: Nov 16, 2004 Post Count: 4865 Status: Offline Project Badges: |
Welcome back Jurisica . I look forward to supporting this project.
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knreed
Former World Community Grid Tech Joined: Nov 8, 2004 Post Count: 4504 Status: Offline Project Badges: |
Just saw this and am excited to start helping with this disease! I noticed also that while I have the box checked to auto add new projects that it did not add this project, so I manually checked it. We run a script that looks for that setting and then opts people in. However, we don't run that script until we have completed deployment and reviewed everything to ensure that we didn't make a mistake somewhere. We are about an hour away from running that script. |
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OldChap
Veteran Cruncher UK Joined: Jun 5, 2009 Post Count: 978 Status: Offline Project Badges: |
Is the 3 day deadline intentional?
----------------------------------------EDIT NVM, saw other thread [Edit 1 times, last edit by OldChap at Nov 8, 2013 5:21:29 PM] |
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