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JmBoullier
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Re: New work starts for Help Fight Childhood Cancer Project

If they are similar to the first 3, let's say about 25 million.
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[Jul 29, 2010 9:37:19 AM]   Link   Report threatening or abusive post: please login first  Go to top 
Sekerob
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Re: New work starts for Help Fight Childhood Cancer Project

In the last target a library of about 2.85 million compounds were put against the target docking simulations. If same, then nearly 9 million are needed to be run. Since the work is chopped up so it does not run too long for the average cruncher i.e. when the tasks do take too long the compound dockings are split up over multiple WU's, there thus no telling how many are needed.

You could follow the current task name number in your client and then derive from there how far we are. My Linux quad is now working on 00035270_n1_0000_0. The last part indicates if there are more for 1 compound, but probably not as the mean run time is just 3.37 hours. At any rate the techs test a set of a dozen or so for each new batch [through the production pipe] to find out how long they run and then decide on sizing them up. These test jobs can be recognized by an anomalous prefix to the WU name, so the techs can find them back easier in the database.

kind of.

PS, this is a sample name of aWU of the previous target towards the end:

HFCC_s2_02844035_s2_0001
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[Jul 29, 2010 9:43:09 AM]   Link   Report threatening or abusive post: please login first  Go to top 
Sekerob
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Re: New work starts for Help Fight Childhood Cancer Project

Pretty impressive, without email, just WCG moving the science back into active and all those boxes starting to pick up work to the tune of having had 20,635 results validate in the first 24 hours being life again.

We will peace ... Crunch On.
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[Jul 29, 2010 11:43:23 AM]   Link   Report threatening or abusive post: please login first  Go to top 
uplinger
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Re: New work starts for Help Fight Childhood Cancer Project

Sek,

With the setup of the initial work units and how many loops are allowed in Autodock (without doing a recompile) we split all the work units in half. Unless the work units become more difficult, it is probably a safe assumption that the 2.85 million per target * 2 for the split is on the low side. Then multiply by 1.25 (to account for possible resends and host checking) to get the high side of estimated results sent out.

This is of course estimations as we still have not tested the other two targets yet.

-Uplinger
[Jul 29, 2010 2:11:47 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: New work starts for Help Fight Childhood Cancer Project

smile Thanks Sek and skgiven, I get no more of the suspending and resuming computation messages after changing the %CPU time to 100. I will check the other machines and add GPU for additional processing since the displays are not active most of the time.
[Jul 29, 2010 3:38:04 PM]   Link   Report threatening or abusive post: please login first  Go to top 
sk..
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Re: New work starts for Help Fight Childhood Cancer Project

dkt, hopefully it will help you to get a blue badge for HFCC good luck
I've changed my WCG preferences to crunch about 40% HFCC - hope to reach 8years before it's all over.
Since yesterday I'm about 4days closer tongue
[Jul 29, 2010 3:58:16 PM]   Link   Report threatening or abusive post: please login first  Go to top 
anhhai
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Re: New work starts for Help Fight Childhood Cancer Project

skgiven, how do you make HFCC do 40% of your work?I have 4 system that only run HFCC and HCC, but WCG more or less decides the percent. (I also have other systems that do other projects).
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[Jul 29, 2010 5:46:24 PM]   Link   Report threatening or abusive post: please login first  Go to top 
bicotz
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shock Re: New work starts for Help Fight Childhood Cancer Project

skgiven, how do you make HFCC do 40% of your work?I have 4 system that only run HFCC and HCC, but WCG more or less decides the percent. (I also have other systems that do other projects).



Make that two of us who want to know....
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[Jul 29, 2010 11:45:10 PM]   Link   Report threatening or abusive post: please login first  Go to top 
sk..
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Re: New work starts for Help Fight Childhood Cancer Project

It's just an approximation; half the WCG tasks on some systems and 1/3rd on others is about 40% - it's not exact, and I may pick up more or less of one projects tasks than another. I run other non-WCG projects, so there is little point trying to be very accurate. It will take a day or two to ballance out at around 40% of WCG tasks, but at least there are no HFCC tasks sitting in PV smile
[Jul 29, 2010 11:46:46 PM]   Link   Report threatening or abusive post: please login first  Go to top 
KWSN - A Shrubbery
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Re: New work starts for Help Fight Childhood Cancer Project

I have a feeling these three targets will go much faster than expected. Plenty of people badge hunting, badge padding for the 10 year, and a very worthwhile project.

Happy to be crunching it again.
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[Jul 30, 2010 12:17:12 AM]   Link   Report threatening or abusive post: please login first  Go to top 
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