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World Community Grid Forums
Category: Completed Research
Forum: Help Fight Childhood Cancer Project Forum
Thread: Autodock 4 Error |
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Thread Status: Active Total posts in this thread: 36
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JmBoullier
Former Community Advisor Normandy - France Joined: Jan 26, 2007 Post Count: 3716 Status: Offline Project Badges: 
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As for P4HT, HFCC jobs have quite a burden with them so running 2 at the same time, one on a virtual core may not be the recommended way to crunch these. Any serious reference to support this statement (I mean for HFCC specifically)? Sekerob or anybody else. Personally I have not logged all of them but for what I still have it's 31 WUs for 17 days of runtime without any particular problem. OK they take longer than if they were running alone, but this is not a problem, it is just working as designed. Cheers. Jean. |
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Sekerob
Ace Cruncher Joined: Jul 24, 2005 Post Count: 20043 Status: Offline |
Let us wait on the answers, before I fill you in where I'm heading, but note that the 6.10 version on quad compared to when I took notes shortly after launch, have virtually no Page Faulting to mention. Mind you, I've been tweaking, patching and cleaning heck out of Vista in the past week, so who knows.
----------------------------------------But do tell us how long longer is in your estimation. I know 2 CEP concurrently takes 20% longer, each, than sequential on a proper dual core. This effectively means 2.4 results are done sequentially in the time it takes 2 to run concurrently. Guess what I'm doing ;D
WCG
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JmBoullier
Former Community Advisor Normandy - France Joined: Jan 26, 2007 Post Count: 3716 Status: Offline Project Badges:
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I have not run any comparative test as their duration is less homogeneous than HCC.
----------------------------------------For the 31 WUs I have logged- - the average duration is 13.18 hours (HCC was about 15 hours) - the shortest was 6.56 hours - the longest was 31.28 hours. If they behave more or less like HCC (the averages seem consistent) a WU needs 50 % more time in dual mode than in single mode, which gives a global throughput 33 % higher in dual mode vs single mode. Regarding page faults there are very few: delta shows 0 most of the time and for one WU which has already run 8:22 hours CPU the total page faults are about 760,000. It was more when I was testing HCC on this machine (1,000-2,000 pf/s) if I remember well. Edit: On the quad running 4 HFCCs under Ubuntu64 right now the average is 40 pf/s over 25 s for the total machine. Cheers. Jean. ---------------------------------------- [Edit 1 times, last edit by JmBoullier at Mar 25, 2009 5:58:38 PM] |
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rilian
Veteran Cruncher Ukraine - we rule! Joined: Jun 17, 2007 Post Count: 1460 Status: Offline Project Badges: 
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Error "incorrect function"
----------------------------------------<core_client_version>5.10.30</core_client_version> <![CDATA[ <message> Incorrect function. (0x1) - exit code 1 (0x1) </message> <stderr_txt> Failed to get VersionInfo size: 1812 INFO:[09:03:35] Start AutoGrid... autogrid: autogrid4: Successful Completion. INFO:[09:04:01] End AutoGrid... Beginning AutoDock... INFO: Setting num_generations: 10000 About to enter main loop...(dockings already completed: 0) _maxGenSeenSoFar changed: 2500 _maxGenSeenSoFar changed: 2626 _maxGenSeenSoFar changed: 2758 _maxGenSeenSoFar changed: 2896 _maxGenSeenSoFar changed: 3041 _maxGenSeenSoFar changed: 3194 _maxGenSeenSoFar changed: 3354 _maxGenSeenSoFar changed: 3522 _maxGenSeenSoFar changed: 3699 _maxGenSeenSoFar changed: 3885 _maxGenSeenSoFar changed: 4080 _maxGenSeenSoFar changed: 4285 _maxGenSeenSoFar changed: 4500 _maxGenSeenSoFar changed: 4726 _maxGenSeenSoFar changed: 4963 _maxGenSeenSoFar changed: 5212 _maxGenSeenSoFar changed: 5473 _maxGenSeenSoFar changed: 5747 _maxGenSeenSoFar changed: 6035 _maxGenSeenSoFar changed: 6337 _maxGenSeenSoFar changed: 6654 _maxGenSeenSoFar changed: 6987 _maxGenSeenSoFar changed: 7337 _maxGenSeenSoFar changed: 7704 _maxGenSeenSoFar changed: 8090 _maxGenSeenSoFar changed: 8495 _maxGenSeenSoFar changed: 8920 _maxGenSeenSoFar changed: 9367 _maxGenSeenSoFar changed: 9836 _maxGenSeenSoFar changed: 10328 Updating Best Energy for WU: 0.00 Finished Docking number 0 Updating Best Energy for WU: -6.85 Finished Docking number 1 Finished Docking number 2 Finished Docking number 3 Finished Docking number 4 Finished Docking number 5 Finished Docking number 6 Finished Docking number 7 Finished Docking number 8 Finished Docking number 9 Finished Docking number 10 Finished Docking number 11 </stderr_txt> ]]> |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
I have 2 WUs with the "Too many torsions have been found" error. They were sent out on 3/27/2009
HFCC_ t1_ 00100048_ TrkB_ 0006_ 0-- HAL9005 Error 3/27/09 21:26:16 3/30/09 09:44:48 0.00 0.1 / 0.0 HFCC_ t1_ 00100050_ TrkB_ 0009_ 0-- HAL9005 Error 3/27/09 18:32:46 3/30/09 09:44:48 0.01 0.1 / 0.0 please let me know if you would like any other details. |
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Sekerob
Ace Cruncher Joined: Jul 24, 2005 Post Count: 20043 Status: Offline |
A new thread was opened to collect the new too many torsions error: http://www.worldcommunitygrid.org/forums/wcg/viewthread?thread=25006
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WCG
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