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alged
Master Cruncher
FRANCE
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Re: Current status of the Drug Search for Leishmaniasis project

Thks to inform us abt that update . smile
It is strange that since 29th of May we did not have it flashing when we open the Boinc client window. wink
Note that DSFL project may end sooner than we think previously
according Sekerob in the thread about crunching chart :

http://www.worldcommunitygrid.org/forums/wcg/viewpostinthread?post=423284

Go back to crunching work ...... cheers
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johncmacalister2010@gmail.com
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Re: Current status of the Drug Search for Leishmaniasis project

As many of you fellow crunchers likely know, in Greek mythology Sisyphus was a king of Ephyra punished for chronic deceitfulness by being compelled to roll an immense boulder up a hill, only to watch it roll back down, and to repeat this action forever.

In crunching for drug research, I sometimes feel much as Sisyphus must have done. At other times I have images of being handed a teaspoon and being ordered to move a mountain from location A to location B.

But, I will continue and have started building another machine. I just bought (on sale) an AMD 8 core FX 8350 and another Antec Three Hundred Two case. The Sabertooth MOBO I want (which, being new will not go on sale) and the liquid cooler will follow next month. I have all the other gazintas (drives, memory, GPUs, etc.) biggrin

My June projects:

DSFL
SN2S

Folding at Home (Alzheimer's) POEM@home
Fight Malaria at Home
GPUGrid
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crunching, crunching, crunching.

AMD Ryzen 5 2600 6-core Processor with Windows 11 64 Pro.

AMD Ryzen 7 3700X 8-Core Processor with Windows 11 64 Pro (part time)


smile
[Jun 6, 2013 9:59:36 AM]   Link   Report threatening or abusive post: please login first  Go to top 
mmstick
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Re: Current status of the Drug Search for Leishmaniasis project

I'm assuming you are also going to install Linux on that machine, which will massively benefit not only because you are using an AMD processor, but because this DSFL and SN2S are using Autodock Vina which runs significantly faster on Linux.
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[Edit 2 times, last edit by mmstick at Jun 7, 2013 9:23:23 AM]
[Jun 7, 2013 9:21:53 AM]   Link   Report threatening or abusive post: please login first  Go to top 
johncmacalister2010@gmail.com
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Re: Current status of the Drug Search for Leishmaniasis project

I'm assuming you are also going to install Linux on that machine, which will massively benefit not only because you are using an AMD processor, but because this DSFL and SN2S are using Autodock Vina which runs significantly faster on Linux.


Thanks for the suggestion which I had not considered. A couple of years ago, I used Linux and had many problems. However, if the difference in processing is significant, I might consider it. Do you have, or do you know where I might find comparative performance data?
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crunching, crunching, crunching.

AMD Ryzen 5 2600 6-core Processor with Windows 11 64 Pro.

AMD Ryzen 7 3700X 8-Core Processor with Windows 11 64 Pro (part time)


smile
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Falconet
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Re: Current status of the Drug Search for Leishmaniasis project

I'm assuming you are also going to install Linux on that machine, which will massively benefit not only because you are using an AMD processor, but because this DSFL and SN2S are using Autodock Vina which runs significantly faster on Linux.


Thanks for the suggestion which I had not considered. A couple of years ago, I used Linux and had many problems. However, if the difference in processing is significant, I might consider it. Do you have, or do you know where I might find comparative performance data?



Here you go

https://secure.worldcommunitygrid.org/forums/wcg/viewthread_thread,34051

Basically, VINA apps(GFAM, DSFL and SN2S) run 50 or 60 percent faster in Linux 64 bits than in Windows 7 64 bits. Linux mint is easy to use and in some ways similar to windows(has a start menu for instance).
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AMD Ryzen 5 1600AF 6C/12T 3.2 GHz - 85W
AMD Ryzen 5 2500U 4C/8T 2.0 GHz - 28W
AMD Ryzen 7 7730U 8C/16T 3.0 GHz
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[Edit 1 times, last edit by Falconet at Jun 7, 2013 1:41:06 PM]
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branjo
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Re: Current status of the Drug Search for Leishmaniasis project

I'm assuming you are also going to install Linux on that machine, which will massively benefit not only because you are using an AMD processor, but because this DSFL and SN2S are using Autodock Vina which runs significantly faster on Linux.


Thanks for the suggestion which I had not considered. A couple of years ago, I used Linux and had many problems. However, if the difference in processing is significant, I might consider it. Do you have, or do you know where I might find comparative performance data?



Here you go

https://secure.worldcommunitygrid.org/forums/wcg/viewthread_thread,34051

Basically, VINA apps(GFAM, DSFL and SN2S) run 50 or 60 percent faster in Linux 64 bits than in Windows 7 64 bits. Linux mint is easy to use and in some ways similar to windows(has a start menu for instance).


Also on Mac OS X. Unfortunately, there is lot of errors there sad
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Crunching@Home since January 13 2000. Shrubbing@Home since January 5 2006

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[Edit 1 times, last edit by branjo at Jun 7, 2013 2:12:20 PM]
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Falconet
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Re: Current status of the Drug Search for Leishmaniasis project

Carmusk,

Could you update the progress chart at DSFL's website?

Thanks
----------------------------------------


AMD Ryzen 5 1600AF 6C/12T 3.2 GHz - 85W
AMD Ryzen 5 2500U 4C/8T 2.0 GHz - 28W
AMD Ryzen 7 7730U 8C/16T 3.0 GHz
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Re: Current status of the Drug Search for Leishmaniasis project

I read about a scientist who wanted to reduce the crunching load for the volunteer pc by simplify the program.i would say dont do that!i prefer to let my pc crunch at full capacity and download a large file.In this way i know i deliver a reliable contribution.

Cheers
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mmstick
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Re: Current status of the Drug Search for Leishmaniasis project

I don't have a single Windows machine on my network. I've been using Ubuntu for a rather long time now without a single problem. In fact, all the AMD OpenCL projects on Linux also process faster than they do on Windows as well. While I might get 4051 SP GFLOPS performance on Windows, I get 4300 SP GFLOPS in Linux with a Radeon HD 7950.

I read about a scientist who wanted to reduce the crunching load for the volunteer pc by simplify the program.i would say dont do that!i prefer to let my pc crunch at full capacity and download a large file.In this way i know i deliver a reliable contribution.

Cheers


Reducing crunch time means a person can crunch more work units in a day, how is that not a good thing?
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[Edit 2 times, last edit by mmstick at Jun 8, 2013 11:29:55 AM]
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johncmacalister2010@gmail.com
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Re: Current status of the Drug Search for Leishmaniasis project

I'm assuming you are also going to install Linux on that machine, which will massively benefit not only because you are using an AMD processor, but because this DSFL and SN2S are using Autodock Vina which runs significantly faster on Linux.


Thanks, branjo, for the advice and the statistics from all who contributed. The new machine, currently being built, will be dual boot Windows/Linux. It should be in production on Friday.
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crunching, crunching, crunching.

AMD Ryzen 5 2600 6-core Processor with Windows 11 64 Pro.

AMD Ryzen 7 3700X 8-Core Processor with Windows 11 64 Pro (part time)


smile
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[Edit 2 times, last edit by John C MacAlister at Jun 11, 2013 2:47:50 AM]
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