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World Community Grid Forums
Category: Completed Research
Forum: Human Proteome Folding - Phase 2
Thread: What's next in HPF2? |
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Thread Status: Active Total posts in this thread: 51
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Martin, You might be correct. We don't currently have anything planned after the 'nh' series, but we better prepare ourselves soon. The grid must be tearing through these work units. It's possible we're getting more grid time than usual. IBM usually looks into these things for us, and I'll ask them to re-evaluate their estimates. Thanks for the heads up; I just discussed a few new experiments with my colleague and we have some exciting ideas. -- Patrick If you've only got through nh then yes - IBM is way off.  We're on mid "ne" now. Crunch crunch crunch! |
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Sekerob
Ace Cruncher Joined: Jul 24, 2005 Post Count: 20043 Status: Offline |
Getting 49,4 CPU years rolling daily average and doing 69,400 WU per day for same.
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WCG
----------------------------------------Please help to make the Forums an enjoyable experience for All! [Edit 1 times, last edit by Sekerob at Mar 1, 2010 4:47:15 PM] |
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uplinger
Former World Community Grid Tech Joined: May 23, 2005 Post Count: 3952 Status: Offline Project Badges: 
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I am looking into my estimates now. It may be a few hours before I know something.
-Uplinger |
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rilian
Veteran Cruncher Ukraine - we rule! Joined: Jun 17, 2007 Post Count: 1460 Status: Offline Project Badges: 
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umm
----------------------------------------did i miss something since when HUMAN proteonome folding project predicting (with rosetta algos) rice WU ?? english is not my native but i did not hear about "rice" part of human body before  By folding related proteins from multiple organisms independently we gain the ability to study how evolution affects and is constrained by protein structure and function AND we greatly expand the sample space for improving our de novo predictions. We're studying this now in an effort to improve our genome annotation pipeline. Hopefully, we'll have a paper published soon that can better describe this for everyone. there are millions of different proteins, have you crunched all human proteins already, or just crunch some other proteins because they are easier (to learn) HPF2 is my main project on WCG, but now im confused with the goals ---------------------------------------- [Edit 2 times, last edit by rilian at Mar 3, 2010 9:50:43 PM] |
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martin64
Senior Cruncher Germany Joined: May 11, 2009 Post Count: 445 Status: Offline Project Badges: 
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We don't currently have anything planned after the 'nh' series, but we better prepare ourselves soon. Indeed. I am crunching an ne693. With an average of about 10 days per "letter", it will be mid April, latest, when we run out of HPF2 work. Regards, Martin  |
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martin64
Senior Cruncher Germany Joined: May 11, 2009 Post Count: 445 Status: Offline Project Badges:
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since when HUMAN proteonome folding project predicting (with rosetta algos) rice WU ?? rilian, I had the same question some time ago, here, maybe you can find the answer there. Regards, Martin |
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rilian
Veteran Cruncher Ukraine - we rule! Joined: Jun 17, 2007 Post Count: 1460 Status: Offline Project Badges:
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since when HUMAN proteonome folding project predicting (with rosetta algos) rice WU ?? rilian, I had the same question some time ago, here, maybe you can find the answer there. Regards, Martin thanks, noW it's a bit more clear im ok with crunching rice if it helps understanding human proteins edit: typo ---------------------------------------- [Edit 1 times, last edit by rilian at Mar 9, 2010 8:41:44 PM] |
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martin64
Senior Cruncher Germany Joined: May 11, 2009 Post Count: 445 Status: Offline Project Badges:
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Crunching nf000 - not much left until nh863, i.e. the end of current work in HPF2...
---------------------------------------- Regards, Martin |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
I am looking into my estimates now. It may be a few hours before I know something. -Uplinger *bump* Any word? I think we're gonna run out of work here soon if the researchers don't get us some new work. |
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Randzo
Senior Cruncher Slovakia Joined: Jan 10, 2008 Post Count: 339 Status: Offline Project Badges:
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I have just downloaded nf415. so maybe 3 or 4 weeks.
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