Index  | Recent Threads  | Unanswered Threads  | Who's Active  | Guidelines  | Search
 

Quick Go »
No member browsing this thread
Thread Status: Active
Total posts in this thread: 30
Posts: 30   Pages: 3   [ 1 2 3 | Next Page ]
[ Jump to Last Post ]
Post new Thread
Author
Previous Thread This topic has been viewed 12002 times and has 29 replies Next Thread
Former Member
Cruncher
Joined: May 22, 2018
Post Count: 0
Status: Offline
Reply to this Post  Reply with Quote 
Help Cure Muscular Dystrophy Update on September 10, 2008

Dear All,

This is to announce that we have finished the analysis of all data from phase I, and that we will soon be able to proceed with the launch of phase II! We have a very good interfacing between JET and MAXDO (JET is the program predicting interaction sites and MAXDO is the docking program running on the grid) and this will let us reduce drastically the number of docking interfaces between pairs of proteins.

The MAXDO code will be finalized in the next few weeks and will be delivered to WCG in say, three weeks. This does not mean that the WCG team will be able to start work on it immediately as they will have to fit in into their schedule. Once they receive the code they will communicate an approximate start date for phase II.

In the meantime we shall finalize the list of proteins that will be docked in phase II and we shall run JET on our own machines to detect potential interaction sites. These detections will filter out MAXDO's input and reduce the number of docking faces crunched on the grid.

I would like to thank you all for the support that you showed us in these last months and before, with your machine time. We all look forward to work together very soon!!

Best regards,

Alessandra
[Sep 10, 2008 3:15:55 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
Cruncher
Joined: May 22, 2018
Post Count: 0
Status: Offline
Reply to this Post  Reply with Quote 
Re: Help Cure Muscular Dystrophy Update on September 10, 2008

Thanx for the update, Alessandra!

Sounds, like I will have a new batch in a forseeable time... biggrin biggrin biggrin
[Sep 10, 2008 3:38:41 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Diana G.
Master Cruncher
Joined: Apr 6, 2005
Post Count: 3003
Status: Offline
Project Badges:
Reply to this Post  Reply with Quote 
Re: Help Cure Muscular Dystrophy Update on September 10, 2008

Awesome!!!!!!!!!!!!!!!
.
----------------------------------------

[Sep 10, 2008 6:13:54 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
Cruncher
Joined: May 22, 2018
Post Count: 0
Status: Offline
Reply to this Post  Reply with Quote 
Re: Help Cure Muscular Dystrophy Update on September 10, 2008

Great news,
my son has a missense point mutation in exon 14 (nucleotide 1616 changes G->A mutation R539Q) and it seems to be the only one to have such a mutation. The RNA seems to be complete and the protein is produced but it seems that for this kind of mutation it is unstable or unfunctional, infact in the muscular tissue it is not present. I hope that this project could help us.

fabama & DANIELE
[Sep 10, 2008 8:10:38 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Morris-83
Cruncher
Joined: Apr 18, 2007
Post Count: 21
Status: Offline
Reply to this Post  Reply with Quote 
Re: Help Cure Muscular Dystrophy Update on September 10, 2008

Ok, good news.
[Sep 11, 2008 9:01:29 AM]   Link   Report threatening or abusive post: please login first  Go to top 
mreuter80
Advanced Cruncher
Joined: Oct 2, 2006
Post Count: 83
Status: Offline
Project Badges:
Reply to this Post  Reply with Quote 
Re: Help Cure Muscular Dystrophy Update on September 10, 2008

Thanks for the update. biggrin
[Sep 11, 2008 2:00:42 PM]   Link   Report threatening or abusive post: please login first  Go to top 
boulmontjj
Senior Cruncher
France
Joined: Nov 17, 2004
Post Count: 317
Status: Offline
Project Badges:
Reply to this Post  Reply with Quote 
applause Re: Help Cure Muscular Dystrophy Update on September 10, 2008

En français :
Très bonne nouvelle Alessandra car nombreux sont ceux qui attendaient avec impatience la reprise de ce projet. applause
Souhaitons que les proverbes "qui va doucement va loin" ou "plus c'est long, plus c'est bon" s'appliqueront à ce projet et qu'il en découlera des avancées significatives et des découvertes qui guériront de nombreux malades dans l'espoir.

In english :
Very good new Alessandra because numerous are the ones who looked forward to the resumption of this project. applause
Let us wish that the proverbs " who goes slowly go far " or " the more it is long, the more it is good " will apply to this project and that it will ensue from it significant headways and discoveries which will cure numerous patients in the hope.
----------------------------------------

Rejoignez nous et visitez le site de l'équipe France ici http://www.grid-france.fr
[Sep 12, 2008 6:24:50 AM]   Link   Report threatening or abusive post: please login first  Go to top 
Zanth
Advanced Cruncher
USA
Joined: Aug 18, 2008
Post Count: 88
Status: Offline
Project Badges:
Reply to this Post  Reply with Quote 
Re: Help Cure Muscular Dystrophy Update on September 10, 2008

Tres bien!
I am very much looking forward to this starting, and will be devoting about 7 days worth of CPU time to this project each and every day. :)
----------------------------------------

[Sep 12, 2008 8:20:25 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
Cruncher
Joined: May 22, 2018
Post Count: 0
Status: Offline
Reply to this Post  Reply with Quote 
Re: Help Cure Muscular Dystrophy Update on September 10, 2008

Thanks for the update smile rose
[Sep 13, 2008 6:22:53 AM]   Link   Report threatening or abusive post: please login first  Go to top 
KerSamson
Master Cruncher
Switzerland
Joined: Jan 29, 2007
Post Count: 1684
Status: Offline
Project Badges:
Reply to this Post  Reply with Quote 
Re: Help Cure Muscular Dystrophy Update on September 10, 2008

Chère Alessandra,
Merci pour cet update et surtout pour ces nouvelles encourageantes.
Nous avons tous conscience de la complexité du travail nécessaire à la préparation d'une nouvelle phase de calcul et beaucoup d'entre nous ont eu des pensées plus que positives durant ces derniers mois pour votre équipe.
Avec un peu de chance, le lancement de cette nouvelle phase pourra être synchrone avec le Téléthon en francophonie européenne wink
Bonne chance pour la suite et à très bientôt,
Yves
---
Dear Alessandra,
Thank you very much for this update and for the encouraging news.
We all are aware about the complexity of the work requested for the preparation of e new computation phase and many of us have devoted your team a lot of positive thoughts during the last months.
With a little bit luck, the launch of the new phase would occur at the same time as the european french speaking Téléthon wink
We wish you a good luck for completing the work !
Seeing forwards for reading you very soon,
Yves
----------------------------------------
[Sep 13, 2008 8:48:56 AM]   Link   Report threatening or abusive post: please login first  Go to top 
Posts: 30   Pages: 3   [ 1 2 3 | Next Page ]
[ Jump to Last Post ]
Post new Thread