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100% Errors on some projects
Human proteome folding 2 works ok, but fightaids@home and genome comparison always produce errors on my system (code 2 - 0x2)

I'm running boinc client/manager 5.4.11 installed on ubuntu server 7.04 (64) + gnome, boinc installed through synaptic, on an amd athlon 64 x2 3500, 1gb RAM with 256mb into video share for an onboard nvidia geforce 6100 gfx.

I tried to install the higher version debian package of boinc, linked to in another post, but the manager said it couldn't find the client, and I reverted to 5.4.11.

Dual core appears to work fine, I have 2 tasks running, both processors showing 98%+ usage by boinc client (terminal - 'top'), and I've changed preferences so that only hpf2 jobs are sent to me, but I'd like to be able to to source jobs from all projects if possible, and use the latest stable release of boinc.

(I'm a linux noob - this is my "learning linux" machine, dual-booting with vista, generally accessed remotely over LAN from my main xp pc)
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Sekerob
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Re: 100% Errors on some projects
Can you post the log entries from the top of the Message tab, that display when you start up BOINC. It will show us what BOINC thinks is available e.g. in memory. FA@H can run up to 450-500mb in VM but with 700mb net ram it should not be an scram issue.

GC is finished... no more work is send out for that project, so for now we just need focussing on FA@H.
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Re: 100% Errors on some projects
Please will you also post the error log from one of the failed work units. You can retrieve the log from the results status page by clicking on the "status" column.
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Re: 100% Errors on some projects
The first message I can see in the manager is
Sun 01 Jul 2007 03:02:56 BST|World Community Grid|Started download of file ld488_00005_ld488.psipred.gz
I don't see any message relating to memory

Benchmark:
Tue 03 Jul 2007 14:39:20 BST||Benchmark results:
Tue 03 Jul 2007 14:39:20 BST|| Number of CPUs: 2
Tue 03 Jul 2007 14:39:20 BST|| 1588 floating point MIPS (Whetstone) per CPU
Tue 03 Jul 2007 14:39:20 BST|| 3573 integer MIPS (Dhrystone) per CPU

Error:
<core_client_version>5.4.11</core_client_version>
<message>
process exited with code 2 (0x2)
</message>
<stderr_txt>
2007-07-03 05:07:23 [World Community Grid] Process creation (../../projects/www.worldcommunitygrid.org/wcg_faah_autodock_5.30_i686-pc-linux-gnu) failed: Error -1
execv: No such file or directory
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Re: 100% Errors on some projects
I've browsed to the /var/lib/boinc-client/ folder and found stdoutdae.old file, which does show the info requested, here it is:
2007-07-01 01:43:21 [---] Starting BOINC client version 5.4.11 for x86_64-pc-linux-gnu
2007-07-01 01:43:21 [---] libcurl/7.15.5 OpenSSL/0.9.8c zlib/1.2.3 libidn/0.6.5
2007-07-01 01:43:21 [---] Data directory: /var/lib/boinc-client
2007-07-01 01:43:21 [---] Processor: 2 AuthenticAMD AMD Athlon(tm) 64 X2 Dual Core Processor 3800+
2007-07-01 01:43:21 [---] Memory: 751.46 MB physical, 2.15 GB virtual
2007-07-01 01:43:21 [---] Disk: 77.80 GB total, 70.54 GB free
2007-07-01 01:43:21 [---] No general preferences found - using BOINC defaults

and yeah, oops, it's a 3800, not 3500 lol, sorry, not my best time of day, bit of a nightowl :) num-pad is a little complex for a tired mind, easy to make mistakes, ... thanks lawrence, had it been 2am and not 2pm I'd probably have noticed the edit icon, ... looking through the errors they all seem to be the same, so I looked to the very beginning, this is the first set of messages relating to fa@h:

2007-07-01 01:56:32 [World Community Grid] Successfully attached to World Community Grid
2007-07-01 01:56:34 [World Community Grid] Started download of file wcg_faah_autodock_5.30_i686-pc-linux-gnu
2007-07-01 01:56:34 [World Community Grid] Started download of file faah_image_linux_5.30.tga
2007-07-01 01:56:38 [World Community Grid] Finished download of file faah_image_linux_5.30.tga
2007-07-01 01:56:38 [World Community Grid] Throughput 123972 bytes/sec
2007-07-01 01:56:38 [World Community Grid] Started download of file faah_dat_linux_5.30.dat
2007-07-01 01:56:40 [World Community Grid] Finished download of file wcg_faah_autodock_5.30_i686-pc-linux-gnu
2007-07-01 01:56:40 [World Community Grid] Throughput 185497 bytes/sec
2007-07-01 01:56:40 [World Community Grid] Started download of file wcg_faah_autodock_5.30_i686-pc-linux-gnu.so
2007-07-01 01:56:41 [World Community Grid] Finished download of file faah_dat_linux_5.30.dat
2007-07-01 01:56:41 [World Community Grid] Throughput 97949 bytes/sec
2007-07-01 01:56:41 [World Community Grid] Started download of file faah1819_d053n145_x2AZ9_02_AD4_parameters.dat
2007-07-01 01:56:43 [World Community Grid] Finished download of file wcg_faah_autodock_5.30_i686-pc-linux-gnu.so
2007-07-01 01:56:43 [World Community Grid] Throughput 148924 bytes/sec
2007-07-01 01:56:43 [World Community Grid] Finished download of file faah1819_d053n145_x2AZ9_02_AD4_parameters.dat
2007-07-01 01:56:43 [World Community Grid] Throughput 973 bytes/sec
2007-07-01 01:56:43 [World Community Grid] Started download of file faah1819_d053n145_x2AZ9_02_faah1819_d053n145_x2AZ9_02.dpf
2007-07-01 01:56:43 [World Community Grid] Started download of file faah1819_d053n145_x2AZ9_02_x2AZ9.pdbqt
2007-07-01 01:56:46 [World Community Grid] Finished download of file faah1819_d053n145_x2AZ9_02_faah1819_d053n145_x2AZ9_02.dpf
2007-07-01 01:56:46 [World Community Grid] Throughput 1184 bytes/sec
2007-07-01 01:56:46 [World Community Grid] Finished download of file faah1819_d053n145_x2AZ9_02_x2AZ9.pdbqt
2007-07-01 01:56:46 [World Community Grid] Throughput 39599 bytes/sec
2007-07-01 01:56:46 [World Community Grid] Started download of file faah1819_d053n145_x2AZ9_02_d053n145.pdbqt
2007-07-01 01:56:46 [World Community Grid] Started download of file faah1819_d053n145_x2AZ9_02_d053n145_x2AZ9_02.gpf
2007-07-01 01:56:49 [World Community Grid] Finished download of file faah1819_d053n145_x2AZ9_02_d053n145.pdbqt
2007-07-01 01:56:49 [World Community Grid] Throughput 1065 bytes/sec
2007-07-01 01:56:49 [World Community Grid] Finished download of file faah1819_d053n145_x2AZ9_02_d053n145_x2AZ9_02.gpf
2007-07-01 01:56:49 [World Community Grid] Throughput 442 bytes/sec
2007-07-01 01:56:50 [---] Rescheduling CPU: files downloaded
2007-07-01 01:56:50 [---] Rescheduling CPU: files downloaded
2007-07-01 01:56:50 [World Community Grid] Process creation (../../projects/www.worldcommunitygrid.org/wcg_faah_autodock_5.30_i686-pc-linux-gnu) failed: Error -1
2007-07-01 01:56:50 [World Community Grid] Starting task faah1819_d053n145_x2AZ9_02_2 using faah version 530
2007-07-01 01:56:51 [World Community Grid] Unrecoverable error for result faah1819_d053n145_x2AZ9_02_2 (process exited with code 2 (0x2))
2007-07-01 01:56:51 [---] Rescheduling CPU: application exited
2007-07-01 01:56:51 [World Community Grid] Computation for task faah1819_d053n145_x2AZ9_02_2 finished
2007-07-01 02:01:39 [World Community Grid] Sending scheduler request to https://secure.worldcommunitygrid.org/boinc/wcg_cgi/fcgi
2007-07-01 02:01:39 [World Community Grid] Reason: To fetch work
2007-07-01 02:01:39 [World Community Grid] Requesting 51840 seconds of new work, and reporting 1 completed tasks
2007-07-01 02:01:44 [World Community Grid] Scheduler request succeeded
2007-07-01 02:01:46 [World Community Grid] Started download of file wcg_fcg1_ssearch_5.14_i686-pc-linux-gnu

Not sure if it'll help, but more information is better than less I guess
----------------------------------------
[Edit 1 times, last edit by Former Member at Jul 3, 2007 3:58:57 PM]
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Re: 100% Errors on some projects
I don't have any advice, but the edit post option is a pen icon to the left of the post title.
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[Edit 1 times, last edit by Former Member at Jul 3, 2007 3:39:57 PM]
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Sekerob
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Re: 100% Errors on some projects
That looks fine on the set-up front, but the job error log is a different kettle of fish (or was it cattle of fish ;>). You might try a project reset as BOINC seemingly looks for a FA@H component it cannot locate. Possibly a project detach and re-attach (make sure to select the existing client option if you do). Both should force a fresh download of the FA@H science application parts.

I wonder whether there was a minimum client level for Linux (?). I'd go up to 5.8.16 anyhow as Benchmark is much more equal to Windows'

Added: Found the identical error in a post at Seti: boinc process exited with code 2 (0x2): http://setiweb.ssl.berkeley.edu/forum_thread.php?id=37248

(sorry, but Seti has been down for the last day or to, so could not look in)
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[Edit 2 times, last edit by Sekerob at Jul 3, 2007 3:58:18 PM]
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Re: 100% Errors on some projects
Thanks Sekerob, I will try re-attaching project once current jobs finish, and see if I can get an updated version of boinc to work
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Re: 100% Errors on some projects
Follow-up: managed to update boinc client and manager to 5.8.17, detached and re-attached wcg, still getting 100% errors on fa@h, updated info:

Error:
<core_client_version>5.8.17</core_client_version>
<![CDATA[
<message>
process exited with code 22 (0x16)
</message>
<stderr_txt>
execv: No such file or directory

</stderr_txt>
]]>


Manager startup messages:

Tue 03 Jul 2007 20:11:57 BST||Starting BOINC client version 5.8.17 for x86_64-pc-linux-gnu
Tue 03 Jul 2007 20:11:57 BST||log flags: task, file_xfer, sched_ops
Tue 03 Jul 2007 20:11:57 BST||Libraries: libcurl/7.15.5 OpenSSL/0.9.8c zlib/1.2.3 libidn/0.6.5
Tue 03 Jul 2007 20:11:57 BST||Data directory: /var/lib/boinc-client
Tue 03 Jul 2007 20:11:57 BST||Processor: 2 AuthenticAMD AMD Athlon(tm) 64 X2 Dual Core Processor 3800+ [Family 15 Model 75 Stepping 2][fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt rdtscp lm 3dnowext 3dn
Tue 03 Jul 2007 20:11:57 BST||Memory: 751.46 MB physical, 2.15 GB virtual
Tue 03 Jul 2007 20:11:57 BST||Disk: 77.80 GB total, 70.62 GB free
Tue 03 Jul 2007 20:11:57 BST||Version change (5.4.11 -> 5.8.17)
Tue 03 Jul 2007 20:11:57 BST|World Community Grid|URL: http://www.worldcommunitygrid.org/; Computer ID: 222800; location: (none); project prefs: default
Tue 03 Jul 2007 20:11:57 BST||General prefs: from World Community Grid (last modified 2007-07-02 00:59:44)
Tue 03 Jul 2007 20:11:57 BST||Host location: none
Tue 03 Jul 2007 20:11:57 BST||General prefs: using your defaults
Tue 03 Jul 2007 20:11:57 BST||Reading preferences override file
Tue 03 Jul 2007 20:11:57 BST||Running CPU benchmarks
Tue 03 Jul 2007 20:12:58 BST||Benchmark results:
Tue 03 Jul 2007 20:12:58 BST|| Number of CPUs: 2
Tue 03 Jul 2007 20:12:58 BST|| 1862 floating point MIPS (Whetstone) per CPU
Tue 03 Jul 2007 20:12:58 BST|| 5451 integer MIPS (Dhrystone) per CPU


Manager messages - installation fa@h:
Wed 04 Jul 2007 21:39:09 BST|World Community Grid|[file_xfer] Started download of file wcg_faah_autodock_5.30_i686-pc-linux-gnu
Wed 04 Jul 2007 21:39:09 BST|World Community Grid|[file_xfer] Started download of file faah_image_linux_5.30.tga
Wed 04 Jul 2007 21:39:13 BST|World Community Grid|[file_xfer] Finished download of file faah_image_linux_5.30.tga
Wed 04 Jul 2007 21:39:13 BST|World Community Grid|[file_xfer] Throughput 84892 bytes/sec
Wed 04 Jul 2007 21:39:13 BST|World Community Grid|[file_xfer] Started download of file faah_dat_linux_5.30.dat
Wed 04 Jul 2007 21:39:15 BST|World Community Grid|[file_xfer] Finished download of file wcg_faah_autodock_5.30_i686-pc-linux-gnu
Wed 04 Jul 2007 21:39:15 BST|World Community Grid|[file_xfer] Throughput 134177 bytes/sec
Wed 04 Jul 2007 21:39:15 BST|World Community Grid|[file_xfer] Started download of file wcg_faah_autodock_5.30_i686-pc-linux-gnu.so
Wed 04 Jul 2007 21:39:16 BST|World Community Grid|[file_xfer] Finished download of file faah_dat_linux_5.30.dat
Wed 04 Jul 2007 21:39:16 BST|World Community Grid|[file_xfer] Throughput 81856 bytes/sec
Wed 04 Jul 2007 21:39:16 BST|World Community Grid|[file_xfer] Started download of file faah1838_d091n940_x2AZ9_01_faah1838_d091n940_x2AZ9_01.dpf
Wed 04 Jul 2007 21:39:18 BST|World Community Grid|[file_xfer] Finished download of file wcg_faah_autodock_5.30_i686-pc-linux-gnu.so
Wed 04 Jul 2007 21:39:18 BST|World Community Grid|[file_xfer] Throughput 120179 bytes/sec
Wed 04 Jul 2007 21:39:18 BST|World Community Grid|[file_xfer] Finished download of file faah1838_d091n940_x2AZ9_01_faah1838_d091n940_x2AZ9_01.dpf
Wed 04 Jul 2007 21:39:18 BST|World Community Grid|[file_xfer] Throughput 853 bytes/sec
Wed 04 Jul 2007 21:39:18 BST|World Community Grid|[file_xfer] Started download of file faah1838_d091n940_x2AZ9_01_AD4_parameters.dat
Wed 04 Jul 2007 21:39:18 BST|World Community Grid|[file_xfer] Started download of file faah1838_d091n940_x2AZ9_01_d091n940.pdbqt
Wed 04 Jul 2007 21:39:21 BST|World Community Grid|[file_xfer] Finished download of file faah1838_d091n940_x2AZ9_01_AD4_parameters.dat
Wed 04 Jul 2007 21:39:21 BST|World Community Grid|[file_xfer] Throughput 837 bytes/sec
Wed 04 Jul 2007 21:39:21 BST|World Community Grid|[file_xfer] Finished download of file faah1838_d091n940_x2AZ9_01_d091n940.pdbqt
Wed 04 Jul 2007 21:39:21 BST|World Community Grid|[file_xfer] Throughput 839 bytes/sec
Wed 04 Jul 2007 21:39:21 BST|World Community Grid|[file_xfer] Started download of file faah1838_d091n940_x2AZ9_01_x2AZ9.pdbqt
Wed 04 Jul 2007 21:39:21 BST|World Community Grid|[file_xfer] Started download of file faah1838_d091n940_x2AZ9_01_d091n940_x2AZ9_01.gpf
Wed 04 Jul 2007 21:39:23 BST|World Community Grid|[file_xfer] Finished download of file faah1838_d091n940_x2AZ9_01_d091n940_x2AZ9_01.gpf
Wed 04 Jul 2007 21:39:23 BST|World Community Grid|[file_xfer] Throughput 311 bytes/sec
Wed 04 Jul 2007 21:39:24 BST|World Community Grid|[file_xfer] Finished download of file faah1838_d091n940_x2AZ9_01_x2AZ9.pdbqt
Wed 04 Jul 2007 21:39:24 BST|World Community Grid|[file_xfer] Throughput 26287 bytes/sec


Manager messages - running fa@h:

Thu 05 Jul 2007 05:14:01 BST|World Community Grid|Starting faah1838_d091n940_x2AZ9_01_2
Thu 05 Jul 2007 05:14:01 BST|World Community Grid|Starting task faah1838_d091n940_x2AZ9_01_2 using faah version 530
Thu 05 Jul 2007 05:14:02 BST|World Community Grid|Deferring communication for 1 min 0 sec
Thu 05 Jul 2007 05:14:02 BST|World Community Grid|Reason: Unrecoverable error for result faah1838_d091n940_x2AZ9_01_2 (process exited with code 22 (0x16))
Thu 05 Jul 2007 05:14:02 BST|World Community Grid|Computation for task faah1838_d091n940_x2AZ9_01_2 finished
Thu 05 Jul 2007 05:14:02 BST|World Community Grid|Output file faah1838_d091n940_x2AZ9_01_2_0 for task faah1838_d091n940_x2AZ9_01_2 absent
Thu 05 Jul 2007 05:14:02 BST|World Community Grid|Output file faah1838_d091n940_x2AZ9_01_2_1 for task faah1838_d091n940_x2AZ9_01_2 absent
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Re: 100% Errors on some projects
Please try this:
sudo apt-get install ia32-libs
(or use Synaptic)

If this fails, please use ldd to see what other dependencies you may be missing.
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[Edit 1 times, last edit by Former Member at Jul 5, 2007 6:45:06 PM]
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