It looks like normal behaviour as you are trying to make double-spending (I'm not sure how did you do it, but probably you imported private key from one node to another):
Node 1:
2016-11-02 04:53:52 CommitTransaction:
CTransaction(hash=c4467c4040, ver=1, vin.size=1, vout.size=3, nLockTime=0)
CTxIn(COutPoint(0d7def897f, 2), scriptSig=3045022100d84ff4701b82bf)
CTxOut(nValue=0.00000000, scriptPubKey=OP_DUP OP_HASH160 219eb26b3050)
CTxOut(nValue=0.00000000, scriptPubKey=OP_RETURN 7b226c6f616e4170706c)
CTxOut(nValue=0.00000000, scriptPubKey=OP_DUP OP_HASH160 a71b2f7f9a00)
Node 2:
2016-11-02 04:53:52 CommitTransaction:
CTransaction(hash=9d6682478e, ver=1, vin.size=1, vout.size=3, nLockTime=0)
CTxIn(COutPoint(0d7def897f, 2), scriptSig=3045022100abed8b598338a8)
CTxOut(nValue=0.00000000, scriptPubKey=OP_DUP OP_HASH160 219eb26b3050)
CTxOut(nValue=0.00000000, scriptPubKey=OP_RETURN 7b226c6f616e4170706c)
CTxOut(nValue=0.00000000, scriptPubKey=OP_DUP OP_HASH160 a71b2f7f9a00)
Please note that you are spending the same input COutPoint(0d7def897f, 2),
This normally lead to :
Node 1:
2016-11-02 04:53:52 Conflicting with in-memory CTxIn(COutPoint(0d7def897f, 2), scriptSig=3045022100abed8b598338a8)
2016-11-02 04:53:52 Missing tx (9d6682478efc9eb15bf912810caf92de65188def0b6380215e649d57b4952b29)
Node 2:
2016-11-02 04:53:52 Conflicting with in-memory CTxIn(COutPoint(0d7def897f, 2), scriptSig=3045022100d84ff4701b82bf)
2016-11-02 04:53:52 Missing tx (c4467c404057bbdb68c592e74831bea0952f5b8838a676fe883fa4e7ef9d640a)
On each node only one transaction is valid. But... you continue to create transactions on each node separately using these two transactions, so the number of conflicting transactions grows.
Now. You are playing with blockchain reorganizations (by switching on/off mining on each node). As a result you can get two long conflicting chains. And every time you switch the chain, all transactions on alternative chain become INVALID.
Next. As private key is shared between wallets, both wallets store all transactions, valid and invalid. From time to time wallet tries to re-accept invalid transaction (as they may become valid because of blockchain reorganization). If the attempt fails, you also see this error message. We will optimize this process in the future.
It is natural behaviour in case of double-spending. To avoid this you should not share private keys between nodes.