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Bon Kuhlman
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applause Protein folding in hundreds instead of trillions of steps?

A French and Italian team has recently devised a way to streamline protein folding, reducing the number of required steps from trillions to hundreds.

Fast folding!

If this were applied to either Folding@home or WCG we could dramatically reduce the time to complete projects like the Human Proteome Folding project.
[Sep 23, 2006 11:00:46 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
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Re: Protein folding in hundreds instead of trillions of steps?

I expect that Folding@Home is looking hard at this research. It is right up their alley.
[Sep 23, 2006 11:41:34 PM]   Link   Report threatening or abusive post: please login first  Go to top 
we45dfa35gh3476
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Re: Protein folding in hundreds instead of trillions of steps?

Discussion of this @ Dr. Baker's group:

http://boinc.bakerlab.org/rosetta/forum_thread.php?id=2324

Dr. Baker:
It certainly is an interesting claim, but I haven't yet seen the paper so cannot really assess it.


Other:
It seems they are describing the actual folding process and how it happens according to the rules of physics. That is more what folding@home is doing - simulating the whole folding process of a protein... the paper Hoelderl1n linked to they studied one tiny protein, with just 36 amino acids. Whether there findings work for other proteins is not clear.

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[Edit 1 times, last edit by we45dfa35gh3476 at Sep 24, 2006 2:22:09 AM]
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Re: Protein folding in hundreds instead of trillions of steps?

Hello we45dfa35gh3476,
In your 2nd quote you omitted the information that the paper was NOT studying an all-atom model of the 36-amino acid protein. Which is a very important limitation.

Lawrence
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