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Jim1348
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

Since I am not willing to push everybody to Linux (even if I prefer Linux), in terms of environmental protection, it is more than necessary to improve such science or to recommend to not select it for non Linux machines.
At the other side, I was not aware (did not check it and maybe missed the info) that the new science is not VINA-based. Based on the raw CPU performance, I am still considering that we face a performance issue; and performance issues represent efficiency issues. Based on the number of hosts computing for WCG, the negative impact on the EP consumption is not negligible.
Cheers,
Yves
---
PS: The other way would be to provide clear affinity recommendation to the members between science, CPU, and OS.

I moved to Linux on my dedicated machines largely for VINA and similar differences on other projects, so I appreciate you concerns for efficiency. But it is really whether it is worth the electrical power for the value of the science gained. We really don't know. It could be worth it for both Windows and Linux, or not worth it for either. Even if there is a 50% difference between the two, that is not likely to make the difference. Just upgrade to the next generation CPU, and you could achieve a comparable savings.
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KerSamson
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

Hi Jim,
regarding IT and its (poor) energy efficiency, I feel terrible.
IT power needs and consumption increased dramatically within the last 20 years and it seems that nobody does really take care of it.
At one side, everybody is encouraged to move to LED lighting devices for limiting the EP consumption and at the other side SaaS based solutions, streaming, and even poorly efficient operating systems are still distributed without any consideration and concerns.
It is probably nice to have (here in Europe) this energy efficiency ranking (A to G) for any type of devices from fridge to car, over TV, washing machine, etc. and at the same time nobody does take care of the real environmental foot print of IT system: replacing a PC because the new Windows version is more demanding, replacing a mobile phone device because the new android version requires more RAM, overloading the network connections because Android push regularly updates of uninstallable (google) services, ...
At least, I would appreciate that WCG and in particular the supported sciences would take more care on this issues.
I know, I am a naive, idealist utopian.
Cheers,
Yves
---
My feeling is that it is ridiculous to support clean energy projects and at the same time not to motivate scientists for more efficient science (even if those do not have to pay the electricity bill).
It is also one of the reasons for me for asking for raspbian support for the Raspberry Pi instead of Android.
----------------------------------------
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mito7
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

I have got couple of betas and 1st errored out with this one:

<core_client_version>7.2.47</core_client_version>
<![CDATA[
<message>
app_version download error: couldn't get input files:
<file_xfer_error>
<file_name>wcgrid_beta26_rosetta_7.08_windows_intelx86</file_name>
<error_code>-224 (permanent HTTP error)</error_code>
<error_message>permanent HTTP error</error_message>
</file_xfer_error>

But next day betas all turning VALID with various run times. Practicaly each batch has his own run time.
Batch 46 - 6h (2 WUs)
Batch 52 - 12h (2 WUs)
Batch 56 - 13h (2 WUs)
on my rig. (I know the pool is small :) )

I am runnig on Win64 but application is 32bit.
----------------------------------------

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SekeRob
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

"At the other side, I was not aware (did not check it and maybe missed the info) that the new science is not VINA-based"

The science engine (rosetta **) behind this beta is discussed up in this thread. Doubtlessly the techs try to bring the performance on par between platforms and eventually will find the best libraries they can use, and else the members will bring it to the attention of the coders, armstrdj foremost it seems on this science. In past the HCC1 got highlighted and fixed, in fact the scale turned the other way :O

** it's as sure as sure can be, else a very elaborate decoy was developed as even the result log is very much mirroring what's seen at Rosetta@home. Not a fan boy, as then when this science ran here before it gave various issues, to include developing an FAQ how to restart a hung task (which happened frequently), without losing progress on the other concurrently running tasks (actually it is equally usable to all hung sciences). The version of engine will have evolved quite a bit, no doubt, no hung tasks reported till now, but the test is small so far, nothing comparable to production, the true test of tests.
----------------------------------------
[Edit 1 times, last edit by SekeRob* at Jul 30, 2017 10:08:00 AM]
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Crystal Pellet
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

Run times varying a lot. 4 tasks with 10 structures each from an Intel Atom CPU Z3735F @ 1.33GHz. OS Win 10 32-bit.

DONE :: 10 structures in 21174.1 cpu seconds Batch 017
DONE :: 10 structures in 27509.3 cpu seconds Batch 017
DONE :: 10 structures in 48983.8 cpu seconds Batch 039
DONE :: 10 structures in 81089.7 cpu seconds Batch 053
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SekeRob
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

And is the cobblestone credit proportional to the runtime on the same machine (please favorably surprise me)
----------------------------------------
[Edit 1 times, last edit by SekeRob* at Jul 30, 2017 10:40:38 AM]
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Crystal Pellet
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

And is the cobblestone credit proportional to the runtime on the same machine (please favorably surprise me)
Do I recognize a question mark. I imagine I see one, so

BETA_ beta26_ 00000053_ 1197_ 1-- LT2 Valid 7/29/17 08:05:31 7/30/17 09:24:46 22.52 / 22.74 212.0 / 212.0
BETA_ beta26_ 00000039_ 1034_ 0-- LT2 Valid 7/29/17 07:16:20 7/30/17 00:03:25 13.61 / 13.79 128.6 / 128.6
BETA_ beta26_ 00000017_ 0152_ 0-- LT2 Valid 7/29/17 07:14:15 7/29/17 17:38:29 7.64 / 7.73 72.1 / 72.1
BETA_ beta26_ 00000017_ 0155_ 0-- LT2 Valid 7/29/17 07:14:15 7/29/17 15:30:30 5.88 / 5.95 55.5 / 55.5
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Jim1348
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

Not a fan boy, as then when this science ran here before it gave various issues, to include developing an FAQ how to restart a hung task (which happened frequently), without losing progress on the other concurrently running tasks (actually it is equally usable to all hung sciences). The version of engine will have evolved quite a bit, no doubt, no hung tasks reported till now, but the test is small so far, nothing comparable to production, the true test of tests.

I run Rosetta a lot, and am always a little nervous about it too. They do really great science, but they have a lot of different experimenters mucking around with their code and coming up with different experiments. But IBM's expertise is getting them to standardize their stuff, so maybe it will work.

PS - Rosetta does fairly well on Windows. There is maybe the usual 15% advantage to Linux, but nothing like the difference on Vina.
----------------------------------------
[Edit 1 times, last edit by Jim1348 at Jul 30, 2017 1:10:46 PM]
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TonyEllis
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

Just aborted this one - progress kept going from 10% -> 14% -> 10 % etc - maybe the next cruncher will make more progress... Linux kernel 2.6.32-642.13.1.v6.i686

Result Name: BETA_ beta26_ 00000053_ 1118_ 0--
<core_client_version>7.2.33</core_client_version>
<![CDATA[
<message>
aborted by user
</message>
<stderr_txt>
[2017- 7-29 7:19:31:] :: BOINC:: Initializing ... ok.
[2017- 7-29 7:19:31:] :: BOINC :: boinc_init()
INFO: result number = 0
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
command: ../../projects/www.worldcommunitygrid.org/wcgrid_beta26_rosetta_7.08_i686-pc-linux-gnu -in::file::zip beta26_databasev2.zip @./beta26_00000053.flags -out::file::silent result_silent.out -run:jran 1910399308 -nstruct 10 -out::level 100 -run::no_scorefile true
Registering options..
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize() End reached
Loaded options.... ok
Processed options.... ok
Initializing random generators... ok
Initialization complete.
Unpacking zip data: ../../projects/www.worldcommunitygrid.org/beta26.beta26_databasev2.zip
Setting database description ...
Setting up checkpointing ...
abrelax ...
abrelax.run
Setting up folding (abrelax) ...
Beginning folding (abrelax) ...
BOINC:: Worker startup.
Starting work on structure: _0001
Finished _0001 in 10507.1 seconds.
Starting work on structure: _0002
[2017- 7-29 17:42:11:] :: BOINC:: Initializing ... ok.
[2017- 7-29 17:42:11:] :: BOINC :: boinc_init()
INFO: result number = 0
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
command: ../../projects/www.worldcommunitygrid.org/wcgrid_beta26_rosetta_7.08_i686-pc-linux-gnu -in::file::zip beta26_databasev2.zip @./beta26_00000053.flags -out::file::silent result_silent.out -run:jran 1910399308 -nstruct 10 -out::level 100 -run::no_scorefile true
Registering options..
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize() End reached
Loaded options.... ok
Processed options.... ok
Initializing random generators... ok
Initialization complete.
Unpacking zip data: ../../projects/www.worldcommunitygrid.org/beta26.beta26_databasev2.zip
Setting database description ...
Setting up checkpointing ...
abrelax ...
abrelax.run
Setting up folding (abrelax) ...
Beginning folding (abrelax) ...
BOINC:: Worker startup.
Starting work on structure: _0002
[2017- 7-30 0:29:57:] :: BOINC:: Initializing ... ok.
[2017- 7-30 0:29:57:] :: BOINC :: boinc_init()
INFO: result number = 0
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
command: ../../projects/www.worldcommunitygrid.org/wcgrid_beta26_rosetta_7.08_i686-pc-linux-gnu -in::file::zip beta26_databasev2.zip @./beta26_00000053.flags -out::file::silent result_silent.out -run:jran 1910399308 -nstruct 10 -out::level 100 -run::no_scorefile true
Registering options..
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize() End reached
Loaded options.... ok
Processed options.... ok
Initializing random generators... ok
Initialization complete.
Unpacking zip data: ../../projects/www.worldcommunitygrid.org/beta26.beta26_databasev2.zip
Setting database description ...
Setting up checkpointing ...
abrelax ...
abrelax.run
Setting up folding (abrelax) ...
Beginning folding (abrelax) ...
BOINC:: Worker startup.
Starting work on structure: _0002
[2017- 7-30 5:29:27:] :: BOINC:: Initializing ... ok.
[2017- 7-30 5:29:27:] :: BOINC :: boinc_init()
INFO: result number = 0
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
command: ../../projects/www.worldcommunitygrid.org/wcgrid_beta26_rosetta_7.08_i686-pc-linux-gnu -in::file::zip beta26_databasev2.zip @./beta26_00000053.flags -out::file::silent result_silent.out -run:jran 1910399308 -nstruct 10 -out::level 100 -run::no_scorefile true
Registering options..
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize() End reached
Loaded options.... ok
Processed options.... ok
Initializing random generators... ok
Initialization complete.
Unpacking zip data: ../../projects/www.worldcommunitygrid.org/beta26.beta26_databasev2.zip
Setting database description ...
Setting up checkpointing ...
abrelax ...
abrelax.run
Setting up folding (abrelax) ...
Beginning folding (abrelax) ...
BOINC:: Worker startup.
Starting work on structure: _0002
[2017- 7-30 10:25:56:] :: BOINC:: Initializing ... ok.
[2017- 7-30 10:25:56:] :: BOINC :: boinc_init()
INFO: result number = 0
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
command: ../../projects/www.worldcommunitygrid.org/wcgrid_beta26_rosetta_7.08_i686-pc-linux-gnu -in::file::zip beta26_databasev2.zip @./beta26_00000053.flags -out::file::silent result_silent.out -run:jran 1910399308 -nstruct 10 -out::level 100 -run::no_scorefile true
Registering options..
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize() End reached
Loaded options.... ok
Processed options.... ok
Initializing random generators... ok
Initialization complete.
Unpacking zip data: ../../projects/www.worldcommunitygrid.org/beta26.beta26_databasev2.zip
Setting database description ...
Setting up checkpointing ...
abrelax ...
abrelax.run
Setting up folding (abrelax) ...
Beginning folding (abrelax) ...
BOINC:: Worker startup.
Starting work on structure: _0002
[2017- 7-30 15:29:44:] :: BOINC:: Initializing ... ok.
[2017- 7-30 15:29:44:] :: BOINC :: boinc_init()
INFO: result number = 0
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
command: ../../projects/www.worldcommunitygrid.org/wcgrid_beta26_rosetta_7.08_i686-pc-linux-gnu -in::file::zip beta26_databasev2.zip @./beta26_00000053.flags -out::file::silent result_silent.out -run:jran 1910399308 -nstruct 10 -out::level 100 -run::no_scorefile true
Registering options..
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize() End reached
Loaded options.... ok
Processed options.... ok
Initializing random generators... ok
Initialization complete.
Unpacking zip data: ../../projects/www.worldcommunitygrid.org/beta26.beta26_databasev2.zip
Setting database description ...
Setting up checkpointing ...
abrelax ...
abrelax.run
Setting up folding (abrelax) ...
Beginning folding (abrelax) ...
BOINC:: Worker startup.
Starting work on structure: _0002
[2017- 7-30 19:17:30:] :: BOINC:: Initializing ... ok.
[2017- 7-30 19:17:30:] :: BOINC :: boinc_init()
INFO: result number = 0
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
command: ../../projects/www.worldcommunitygrid.org/wcgrid_beta26_rosetta_7.08_i686-pc-linux-gnu -in::file::zip beta26_databasev2.zip @./beta26_00000053.flags -out::file::silent result_silent.out -run:jran 1910399308 -nstruct 10 -out::level 100 -run::no_scorefile true
Registering options..
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize() End reached
Loaded options.... ok
Processed options.... ok
Initializing random generators... ok
Initialization complete.
Unpacking zip data: ../../projects/www.worldcommunitygrid.org/beta26.beta26_databasev2.zip
Setting database description ...
Setting up checkpointing ...
abrelax ...
abrelax.run
Setting up folding (abrelax) ...
Beginning folding (abrelax) ...
BOINC:: Worker startup.
Starting work on structure: _0002
[2017- 7-30 21: 0: 3:] :: BOINC:: Initializing ... ok.
[2017- 7-30 21: 0: 3:] :: BOINC :: boinc_init()
INFO: result number = 0
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
command: ../../projects/www.worldcommunitygrid.org/wcgrid_beta26_rosetta_7.08_i686-pc-linux-gnu -in::file::zip beta26_databasev2.zip @./beta26_00000053.flags -out::file::silent result_silent.out -run:jran 1910399308 -nstruct 10 -out::level 100 -run::no_scorefile true
Registering options..
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize() End reached
Loaded options.... ok
Processed options.... ok
Initializing random generators... ok
Initialization complete.
Unpacking zip data: ../../projects/www.worldcommunitygrid.org/beta26.beta26_databasev2.zip
Setting database description ...
Setting up checkpointing ...
abrelax ...
abrelax.run
Setting up folding (abrelax) ...
Beginning folding (abrelax) ...
BOINC:: Worker startup.
Starting work on structure: _0002

</stderr_txt>
]]>

----------------------------------------
----------------------------------------
[Edit 1 times, last edit by TonyEllis at Jul 30, 2017 2:06:53 PM]
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Psalm103
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Re: New Beta Test - July 21, 2017 [ Issues Thread ]

Just had 3 WU error out when my machine did an automatic reboot last night. Unfortunately I can't acess the machine now to provide more details.

Thanks,
Ed
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