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ChristianVirtual
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Japan
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Newbie on WCG; interested in visualization

Hello community,

I'm new to WCG; but not new to DC projects overall (rather active over at F@H).

Beside the computing itself I'm "fanatic" on visualization and mobile programming. For F@H I have my own protein viewer in OpenGL on iOS running; now that I started a bit more with WCG I think about adding that to my tool.

I see a number of files like
-rw-r--r-- 1 boinc boinc   4304 Apr 22 01:53 e7242e9cc9401e50afb95681348226d9.pdbqt
-rw-r--r-- 1 boinc boinc 4304 Apr 22 03:16 efd233ac2c87c2031a6d52b64155f48f.pdbqt
-rw-r--r-- 1 boinc boinc 4304 Apr 22 03:26 f45bd1727ecf13e79ad922c2022725cf.pdbqt
-rw-r--r-- 1 boinc boinc 346640 Apr 22 02:40 fahv.3j3y-_n-P4_Rigid.pdbqt
-rw-r--r-- 1 boinc boinc 4304 Apr 22 02:12 fbc6ed1a4731efeeca0f468f3fa62027.pdbqt
-rw-r--r-- 1 boinc boinc 4304 Apr 22 03:10 fe8dbb4a096820716662bcdc148faca1.pdbqt
-rw-r--r-- 1 boinc boinc 4304 Apr 22 03:03 SCC1_0000345_Bct-E_3664_Bct-E_flex.pdbqt
-rw-r--r-- 1 boinc boinc 4304 Apr 22 03:18 SCC1_0000345_Bct-E_4672_Bct-E_flex.pdbqt
-rw-r--r-- 1 boinc boinc 374552 Apr 21 14:40 scc1.Bct-E.pdbqt


I found on the net the format description for pdbqt files; rather straightforward; but struggle to understand how the files are linked to each other (if at all)

E.g. the scc1.Bct-E.pdbqt file describe the full protein ; but what are the smaller pdbqt files for ? Any naming conventions ?

Any hint for further readup or advice would be much appretiated.
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Active with WCG, GPUGrid, F@H
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[Edit 2 times, last edit by ChristianVirtual at Apr 22, 2017 7:11:11 AM]
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SekeRob
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Re: Newbie on WCG; interested in visualization

(AutoDock) AD VINA, which is the science engine, is open source, i.e. the meaning is likely found there.
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