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  Thread: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]

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JSYKES
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
I had a couple of dozen Betas - all bar three have validated - the others are in PV - potentially for another day or so. All appeared to process without incident.
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[Feb 5, 2016 11:24:52 PM]   Link   Report threatening or abusive post: please login first  Go to top 
PU1JFX
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
I received 14 WU's. 13 validated. 1 PV.
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[Feb 6, 2016 2:36:00 AM]   Link   Report threatening or abusive post: please login first  Go to top 
9maMSSuNWXgttyKdZhMemeXmEx8
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
All valid here
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[Feb 6, 2016 5:28:30 PM]   Link   Report threatening or abusive post: please login first  Go to top 
deltavee
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
Got a resend with the following error:

Result Name: BETA_ MCM1_ 0020456_ 9297_ 0--
<core_client_version>6.10.58</core_client_version>
<![CDATA[
<message>
Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
Commandline = projects/www.worldcommunitygrid.org/wcgrid_beta17_7.36_windows_x86_64 -SettingsFile MCM1_0020456_9297.txt -DatabaseFile dataset-17_72_SDG_v1.txt
Settings File
DateOfDesign = 08/05/2014
Designer = PMCC_OCI_0.1
WorkOrderID = 0020456_9297
DatasetID = 17_72_SDG_v1
NumberOfGenesInStartingSignature = 35
NumberOfGenesInSignatureMin = 35
NumberOfGenesInSignatureMax = 35
GroupVectorValues = {A}{B}{C}{D}{E}{F}
ExplicitStartingGeneSignatures = A B D F
StartingGeneSignatureAlgorithm = randomFixedLengthSearch
SearchAlgorithmNumberToCreate = 3075
SearchAlgorithmSequentialStartPosition = 5
RunPermutationAlgorithm = 0
PermutationGroups = A
PermutationGroupsForReplacement = G
PermutationAlgorithm = replaceFromRandomlyToRandomlyGreedy
PermutationsNumIterations = 0
OptimizationAlgorithmFrequency = 0 0 1
FBeta = 1.5
SimAnnealIMax = 20000
SimAnnealAlpha = 0.9996
FitnessFn = 0
MinFitness = 0.37
NReps = 10
TrainFrac = 0.7
NFolds = 10
VMethod = LOO
ModelType = SVM
SvmArgs = "-v 0 -c 0.1 -t 1 -d 2 -r 0"

SvmLearnLimit = 500000
RSeed = 160879298


[05:56:50] Initializing
[05:57:21] Running
[05:57:21] EvaluateFitnessOfStartingGeneSignatures 3075

</stderr_txt>
]]>
[Feb 7, 2016 11:35:43 AM]   Link   Report threatening or abusive post: please login first  Go to top 
uplinger
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
The overall beta was a success. We are promoting this version of the application to production.

Thank you for your support testing this version of the application!

-Uplinger
[Feb 8, 2016 6:03:58 PM]   Link   Report threatening or abusive post: please login first  Go to top 
pcwr
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
Why do I still have Beta WUs showing in my results status from Feb 2016?

BETA_ E236229_ 162_ S.314.C36F1H24N7S1.CBCLRHAAZREDBF-UHFFFAOYSA-N.1_ s1_ 14_ 4-- bns-w7-amd Error 2/21/16 09:25:03 2/21/16 14:01:28 0.00 / 0.03 0.6 / 0.0
BETA_ E236225_ 800_ S.314.C38H27N5O3.KOYOJQMVWKMKCJ-UHFFFAOYSA-N.17_ s1_ 14_ 3-- bns-w7-amd Error 2/21/16 06:57:49 2/21/16 07:00:32 0.00 / 0.01 0.2 / 0.0
BETA_ E236225_ 235_ S.314.C40H30N4S1.IQHILTIOQJURJO-UHFFFAOYSA-N.8_ s1_ 14_ 4-- bns-w7-dells17 Error 2/20/16 19:43:08 2/20/16 22:27:52 0.00 / 0.23 4.4 / 0.0
BETA_ E236229_ 116_ S.316.C36H26N6O2S1.JZPGOAGXPVIBTO-UHFFFAOYSA-N.1_ s1_ 14_ 2-- bns-w7-dells17 Error 2/20/16 18:32:30 2/20/16 19:39:10 0.00 / 0.23 4.6 / 0.0
BETA_ E236227_ 370_ S.316.C37H27N5O2S1.CLSMDEVBWLRRMK-UHFFFAOYSA-N.19_ s1_ 14_ 3-- bns-w7-dells17 Error 2/20/16 17:55:21 2/20/16 18:44:30 0.00 / 0.16 3.1 / 0.0
BETA_ E236229_ 599_ S.314.C36F1H24N7S1.WGGFWBWAMVMMRE-UHFFFAOYSA-N.19_ s1_ 14_ 4-- bns-w7-dells17 Error 2/20/16 17:55:21 2/20/16 18:43:47 0.00 / 0.18 3.6 / 0.0
BETA_ E236228_ 390_ S.314.C36H24N6O4.UZLSSUONXVSSFV-UHFFFAOYSA-N.9_ s1_ 14_ 3-- bns-w7-dells17 Error 2/20/16 17:55:21 2/20/16 18:44:30 0.00 / 0.01 0.2 / 0.0
BETA_ E236229_ 263_ S.314.C36F1H24N7S1.XMCJPSGEQLWDQM-UHFFFAOYSA-N.13_ s1_ 14_ 1-- bns-w7-amd Error 2/20/16 17:30:04 2/21/16 04:22:39 0.00 / 0.00 0.1 / 0.0
BETA_ E236226_ 665_ S.314.C34H25N3O4S2.REKYBSQMRBZBLL-UHFFFAOYSA-N.16_ s1_ 14_ 2-- bns-w7-amd Error 2/20/16 15:37:06 2/21/16 04:22:39 0.00 / 0.01 0.1 / 0.0
BETA_ E236226_ 992_ S.314.C37H25N5O4.SRRGUXAQXHUKPZ-UHFFFAOYSA-N.2_ s1_ 14_ 3-- bns-w7-amd Error 2/20/16 15:37:06 2/21/16 04:22:39 0.00 / 0.03 0.8 / 0.0
BETA_ E236226_ 959_ S.314.C37H25N5O4.SQTULOFNBXSGMJ-UHFFFAOYSA-N.2_ s1_ 14_ 2-- bns-w7-amd Error 2/20/16 15:37:05 2/21/16 04:22:39 0.00 / 0.01 0.2 / 0.0
BETA_ MCM1_ 0020370_ 3909_ 1-- bns-w7-amd Valid 2/3/16 19:17:22 2/4/16 07:35:50 4.06 / 4.08 96.2 / 108.0
BETA_ MCM1_ 0020370_ 3722_ 0-- bns-w7-amd Valid 2/3/16 19:17:22 2/4/16 04:26:59 3.99 / 4.01 94.6 / 78.7
BETA_ MCM1_ 0020370_ 9693_ 0-- bns-w7-amd Valid 2/3/16 18:41:06 2/4/16 02:48:32 3.94 / 4.07 96.0 / 102.4
BETA_ MCM1_ 0020370_ 9698_ 1-- bns-w7-amd Valid 2/3/16 18:41:06 2/4/16 02:48:32 4.05 / 4.17 98.3 / 116.3

Patrick
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Falconet
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
pcwr,

It's normal for BETA WU's to remain there for longer than usual so the techs can analyse the results, IIRC.
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[Apr 2, 2016 12:38:03 PM]   Link   Report threatening or abusive post: please login first  Go to top 
pcwr
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
So why did my March ones go within a week?

Patrick
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Falconet
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
So why did my March ones go within a week?

Patrick


HST already launched.

I haven't been paying attention to the CEP2 BETA, but I assume that the new app/parameters/whatever still isn't good for production.
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[Edit 3 times, last edit by Falconet at Apr 2, 2016 1:53:20 PM]
[Apr 2, 2016 1:46:41 PM]   Link   Report threatening or abusive post: please login first  Go to top 
DSL Freak
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Re: Beta Test for Mapping Cancer Markers - Feb 3rd, 2016 [ Issues Thread ]
I got 6 wu's 4 of them are valid and 2 are just getting ready to start. I suspended them with Leave in memory unchecked and they all restarted where the left off.

Looking good so far.
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Crunchin' for a cure!
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