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World Community Grid Forums
Category: Completed Research
Forum: FightAIDS@Home
Thread: Warnings in the result file |
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Thread Status: Active Total posts in this thread: 3
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staffann
Cruncher Joined: Nov 19, 2005 Post Count: 26 Status: Offline Project Badges: 
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There are a few warnings in the result file that I seem to have on quite many workunits. I have enclosed part of the file below, and marked the relevant warnings as bold.
----------------------------------------I'd like to ask if they are a real problem. If they are, something needs to be done. If not, should they be warnings at all? There are 3 warnings I've marked: 1. Warning about VersionInfo size 2. Warning about divide by zero. Usually not a good sign! 3. Warning about unrecognised keyword: compute_unbound_extended /Staffan <core_client_version>5.4.9</core_client_version> <stderr_txt> World Community Grid AutoDock (projects/www.worldcommunitygrid.org/wcg_faah_autodock_5.28_windows_intelx86) version Failed to get VersionInfo size: 1812 Failed to get VersionInfo size: 1812 INFO: projects/www.worldcommunitygrid.org/wcg_faah_autodock_5.28_windows_intelx86 Start AutoGrid... INFO:[15:42:30] Start AutoGrid... autogrid: WARNING! While calculating an H-O or H-N bond vector... Attempt to divide by zero was just prevented. Are the coordinates of atoms 908 and 908 the same? autogrid: WARNING! While calculating an H-O or H-N bond vector... Attempt to divide by zero was just prevented. Are the coordinates of atoms 915 and 915 the same? autogrid: WARNING! While calculating an H-O or H-N bond vector... Attempt to divide by zero was just prevented. Are the coordinates of atoms 1831 and 1831 the same? autogrid: WARNING! While calculating an H-O or H-N bond vector... Attempt to divide by zero was just prevented. Are the coordinates of atoms 1838 and 1838 the same? autogrid: autogrid4: Successful Completion. wcg_checkpoint() called Starting to checkpoint ... Debug: Start saveState Debug: checkpoint start Debug: Before boinc_checkpoint_completed Checkpoint complete INFO:[15:44:00] End AutoGrid... Beginning AutoDock... INFO: Setting num_generations: 27000 Setting maxGen to 6750 autodock4: WARNING: Unrecognized keyword in docking parameter file, in line: compute_unbound_extended # compute extended ligand energyINFO: No state to restore. Start from the beginning. About to enter main loop...(dockings already completed: 0)  |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
These are normal. While the warnings may appear useless now, they may be of use when things go wrong and the scientists need to diagnose the problem. I think it's just simpler to leave the warnings in.
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staffann
Cruncher Joined: Nov 19, 2005 Post Count: 26 Status: Offline Project Badges:
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Thank you for the answer.
----------------------------------------As a programmer myself, I agree that having warning messages in the code is a good thing. However, there should never be warning messages when everything works normally because users will get used to there being warnings and won't notice any additional ones. Anyway, knowing everything is alright is enough for me. Thanks! |
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