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World Community Grid Forums
Category: Completed Research
Forum: Human Proteome Folding
Thread: A question for one of the programmers. |
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Thread Status: Active Total posts in this thread: 4
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
I'm a Bioinformatics major at umass amherst, I'm writing a ~20 page paper about different algorithmic approachs to modeling protein folding for my graduate enzymology class.
Can you point me towards some papers or texts that would be my best resources? Also, is it possible to get code or an algorithm description that was used in the world comm. grid project? Thank you, you may e-mail me if you like. |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Hello ABruso,
----------------------------------------We are using the low-resolution AbInitio section of the Rosetta program developed in Baker Lab (David Baker's playground) at the University of Washington in Seattle, WA, USA. Some URLs: http://bakerlab.org/ (Click on PUBLICATIONS 1997-2005) http://boinc.bakerlab.org/rosetta/ (some code is going to be released http://boinc.bakerlab.org/rosetta/forum_thread.php?id=349 ) http://www.rosettacommons.org/ http://www.systemsbiology.org/Scientists_and_..._Proteome_Folding_Project Hope this helps, mycrofth [Edit 2 times, last edit by Former Member at Nov 15, 2005 6:18:25 AM] |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Yes it is helpful, what are some other approaches developed by other labs to the protein folding problem?
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Here is the home page for CASP6 ( http://predictioncenter.org/casp6/Casp6.html ) 6th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction held at Gaeta (Italy) on December 4-8, 2004.
The ABSTRACTS lead to all the major players. But don't ask us to explain them. We are just crunchers here.  |
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