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Falconet
Master Cruncher Portugal Joined: Mar 9, 2009 Post Count: 3315 Status: Offline Project Badges:
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I've got this error on 3 Autodock tasks today.
----------------------------------------faah835620_ ZINC16285754_ 1_ x4GVMaINleB_ 00_ 1-- Mint Error 27-04-2014 09:16:13 27-04-2014 18:48:24 2.87 / 3.05 69.5 / 0.0 faah835618_ ZINC09010075_ 1_ x4GVMaINleB_ 00_ 2-- Mint Error 27-04-2014 09:16:13 27-04-2014 18:28:12 1.27 / 1.38 31.3 / 0.0 faah835618_ ZINC14741358_ 1_ x4GVMaINleB_ 00_ 2-- Mint Error 27-04-2014 09:16:13 27-04-2014 16:09:58 0.85 / 0.89 20.3 / 0.0 <core_client_version>7.2.7</core_client_version> <![CDATA[ <message> process exited with code 193 (0xc1, -63) </message> <stderr_txt> INFO:[16:15:34] Start AutoGrid... autogrid4: WARNING: Oxygen atom found with no bonded atoms, atom serial number 17, atom_type 4 autogrid4: WARNING: Oxygen atom found with no bonded atoms, atom serial number 1412, atom_type 4 autogrid4: Successful Completion. INFO:[16:15:59] End AutoGrid... INFO:[16:15:59] Start AutoDock... INFO: In AutoDock main_autodock() Beginning AutoDock... INFO: Setting num_generations: 27000 About to enter main loop...(dockings already completed: 0) _maxGenSeenSoFar changed: 6750 Updating Best Energy for WU: 0.00 Finished Docking number 0 Finished Docking number 1 Finished Docking number 2 Finished Docking number 3 Finished Docking number 4 Updating Best Energy for WU: -8.91 Finished Docking number 5 Finished Docking number 6 Finished Docking number 7 Finished Docking number 8 Updating Best Energy for WU: -9.27 Finished Docking number 9 Finished Docking number 10 Finished Docking number 11 Finished Docking number 12 Finished Docking number 13 Finished Docking number 14 Finished Docking number 15 Finished Docking number 16 Finished Docking number 17 Finished Docking number 18 Finished Docking number 19 Finished Docking number 20 Finished Docking number 21 Finished Docking number 22 Finished Docking number 23 Finished Docking number 24 Finished Docking number 25 Finished Docking number 26 Finished Docking number 27 Finished Docking number 28 Finished Docking number 29 Updating Best Energy for WU: -9.43 Finished Docking number 30 Finished Docking number 31 Finished Docking number 32 Finished Docking number 33 Finished Docking number 34 Finished Docking number 35 Finished Docking number 36 Finished Docking number 37 Finished Docking number 38 Finished Docking number 39 Finished Docking number 40 Finished Docking number 41 Finished Docking number 42 Finished Docking number 43 Finished Docking number 44 Finished Docking number 45 Finished Docking number 46 Finished Docking number 47 Finished Docking number 48 Finished Docking number 49 Finished Docking number 50 *** glibc detected *** ../../projects/www.worldcommunitygrid.org/wcgrid_faah_7.16_x86_64-pc-linux-gnu: malloc(): memory corruption: 0x00000000068070d0 *** ======= Backtrace: ========= [0x51a14e] [0x51be1b] [0x4c559a] [0x4c7419] [0x43a3de] [0x41303b] [0x413361] [0x404b53] [0x41ea6a] [0x44f7ef] [0x450b3f] [0x4ee330] [0x4001b9] ======= Memory map: ======== 00400000-005fa000 r-xp 00000000 08:05 4718962 /var/lib/boinc-client/projects/www.worldcommunitygrid.org/wcgrid_faah_7.16_x86_64-pc-linux-gnu 007fa000-007fe000 rw-p 001fa000 08:05 4718962 /var/lib/boinc-client/projects/www.worldcommunitygrid.org/wcgrid_faah_7.16_x86_64-pc-linux-gnu 007fe000-0486e000 rw-p 00000000 00:00 0 0600e000-06d69000 rw-p 00000000 00:00 0 [heap] 40b18000-40b19000 ---p 00000000 00:00 0 40b19000-40b20000 rw-p 00000000 00:00 0 [stack:22171] 7fd770000000-7fd77002a000 rw-p 00000000 00:00 0 7fd77002a000-7fd774000000 ---p 00000000 00:00 0 7fd776edf000-7fd7782e0000 rw-p 00000000 00:00 0 7fd7782e0000-7fd7782e3000 rw-s 00000000 08:05 4851011 /var/lib/boinc-client/slots/1/boinc_faah_1 7fd7782e6000-7fd7782e8000 rw-p 00000000 00:00 0 7fd7782e8000-7fd7782ea000 rw-s 00000000 08:05 4850627 /var/lib/boinc-client/slots/1/boinc_mmap_file 7fd7782ea000-7fd7782ee000 rw-p 00000000 00:00 0 7fff6887f000-7fff68c45000 rw-p 00000000 00:00 0 [stack] 7fff68cb0000-7fff68cb2000 r-xp 00000000 00:00 0 [vdso] ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vsyscall] SIGABRT: abort called Stack trace (18 frames): [0x45f557] [0x4ed3d0] [0x53cfd5] [0x4f5f20] [0x51154b] [0x51a14e] [0x51be1b] [0x4c559a] [0x4c7419] [0x43a3de] [0x41303b] [0x413361] [0x404b53] [0x41ea6a] [0x44f7ef] [0x450b3f] [0x4ee330] [0x4001b9] Exiting... </stderr_txt> ]]> FAHV and other FAAH are validating just fine. Running Linux Mint 16 x64 on an AMD A8-6500 3.5 GHZ. No wingmen reported these tasks yet (only a few user aborted and detached) A workunit generation error? ![]() - AMD Ryzen 5 1600AF 6C/12T 3.2 GHz - 85W - AMD Ryzen 5 2500U 4C/8T 2.0 GHz - 28W - AMD Ryzen 7 7730U 8C/16T 3.0 GHz [Edit 1 times, last edit by Falconet at Apr 27, 2014 6:52:50 PM] |
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armstrdj
Former World Community Grid Tech Joined: Oct 21, 2004 Post Count: 695 Status: Offline Project Badges:
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I ran the first workunit you have listed standalone without any issue. Let me know once a wingman finishes how it ends up? If you continue to have issues you may want to run a hardware memory test to rule out any hardware issues.
Thanks, armstrdj |
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Falconet
Master Cruncher Portugal Joined: Mar 9, 2009 Post Count: 3315 Status: Offline Project Badges:
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armstrdj,
----------------------------------------Two of 4 error tasks have since been validated by wingmen. I did run memtest just after posting here and it didn't find any errors. I haven't had any errors since so I am going to assume this was just a fluke. Thanks ![]() - AMD Ryzen 5 1600AF 6C/12T 3.2 GHz - 85W - AMD Ryzen 5 2500U 4C/8T 2.0 GHz - 28W - AMD Ryzen 7 7730U 8C/16T 3.0 GHz |
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