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Randzo
Senior Cruncher Slovakia Joined: Jan 10, 2008 Post Count: 339 Status: Offline Project Badges: ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Hello,
one of my tasks ended with an error process exited with code 195 (0xc3, -61). In error log there is a entry that I should contact Dr. Oleg Trott, what doesn't seem a good idea to me to bother someone, when I have no idea about the technical details. Do you have any suggestions WCG techs maybe especially Armstrdj as far as your name is mentioned in the log ;-) An internal error occurred in /home/armstrdj/projects/android/NDK_Build/android-ndk-r8c/samples/VINA-wcg/jni/coords.cpp(26). In case you need any info or anything else just let me know, you can contact me at e-mail in case it is needed. Thank you in advance. Full error log in quotation marks: "Result Name: FAHV_ x3NF8_ A_ IN_ LEDGF_ 0050108_ 1180_ 1-- <core_client_version>7.2.8</core_client_version> <![CDATA[ <message> process exited with code 195 (0xc3, -61) </message> <stderr_txt> INFO: No state to restore. Start from the beginning. [20:46:38] Number of tasks = 7 [20:46:38] Starting task 0,CPU time is 0.000000. [20:46:38] ./ZINC32930498.pdbqt size = 28 9 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 Quit requested: Exiting INFO: No state to restore. Start from the beginning. [21:39:42] Number of tasks = 7 [21:39:42] Starting task 0,CPU time is 0.000000. [21:39:42] ./ZINC32930498.pdbqt size = 28 9 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 [23:21:56] Finished task #0 cpu time used 1605.980000 [23:21:56] Starting task 1,CPU time is 1605.980000. [23:21:56] ./ZINC32930499.pdbqt size = 32 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 [01:36:45] Finished task #1 cpu time used 1977.900000 [01:36:45] Starting task 2,CPU time is 3583.880000. [01:36:45] ./ZINC32930500.pdbqt size = 32 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 Quit requested: Exiting [08:12:48] Number of tasks = 7 [08:12:48] Starting task 2,CPU time is 3583.880000. [08:12:48] ./ZINC32930500.pdbqt size = 32 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 [08:54:35] Finished task #2 cpu time used 642.910000 [08:54:35] Starting task 3,CPU time is 4226.790000. [08:54:35] ./ZINC32930501.pdbqt size = 25 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 Quit requested: Exiting [09:58:22] Number of tasks = 7 [09:58:22] Starting task 3,CPU time is 4226.790000. [09:58:22] ./ZINC32930501.pdbqt size = 25 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 [10:14:41] Finished task #3 cpu time used 259.880000 [10:14:41] Starting task 4,CPU time is 4486.670000. [10:14:41] ./ZINC32930502.pdbqt size = 25 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 [11:29:05] Finished task #4 cpu time used 1107.580000 [11:29:05] Starting task 5,CPU time is 5594.250000. [11:29:05] ./ZINC32930503.pdbqt size = 24 6 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 Quit requested: Exiting [12:13:10] Number of tasks = 7 [12:13:10] Starting task 4,CPU time is 4486.670000. [12:13:10] ./ZINC32930502.pdbqt size = 25 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 An internal error occurred in /home/armstrdj/projects/android/NDK_Build/android-ndk-r8c/samples/VINA-wcg/jni/coords.cpp(26). Please contact the author, Dr. Oleg Trott <ot14@columbia.edu>, so that this problem can be resolved. The reproducibility of the error may be vital, so please remember to include the following in your problem report: * the EXACT error message, * your version of the program, * the type of computer system you are running it on, * all command line options, * configuration file (if used), * ligand file as PDBQT, * receptor file as PDBQT, * flexible side chains file as PDBQT (if used), * output file as PDBQT (if any), * input (if possible), * random seed the program used (this is printed when the program starts). Thank you! [12:14:01] ERROR: VINA exited with rc = 1. VINA Error: An internal error occurred in /home/armstrdj/projects/android/NDK_Build/android-ndk-r8c/samples/VINA-wcg/jni/coords.cpp(26). Please contact the author, Dr. Oleg Trott <ot14@columbia.edu>, so that this problem can be resolved. The reproducibility of the error may be vital, so please remember to include the following in your problem report: * the EXACT error message, * your version of the program, * the type of computer system you are running it on, * all command line options, * configuration file (if used), * ligand file as PDBQT, * receptor file as PDBQT, * flexible side chains file as PDBQT (if used), * output file as PDBQT (if any), * input (if possible), * random seed the program used (this is printed when the program starts). Thank you! Retrying task. [12:14:01] Starting task 4,CPU time is 4486.670000. [12:14:01] ./ZINC32930502.pdbqt size = 25 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 Quit requested: Exiting [12:17:09] Number of tasks = 7 [12:17:09] Starting task 4,CPU time is 4486.670000. [12:17:09] ./ZINC32930502.pdbqt size = 25 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 An internal error occurred in /home/armstrdj/projects/android/NDK_Build/android-ndk-r8c/samples/VINA-wcg/jni/coords.cpp(26). Please contact the author, Dr. Oleg Trott <ot14@columbia.edu>, so that this problem can be resolved. The reproducibility of the error may be vital, so please remember to include the following in your problem report: * the EXACT error message, * your version of the program, * the type of computer system you are running it on, * all command line options, * configuration file (if used), * ligand file as PDBQT, * receptor file as PDBQT, * flexible side chains file as PDBQT (if used), * output file as PDBQT (if any), * input (if possible), * random seed the program used (this is printed when the program starts). Thank you! [12:17:59] ERROR: VINA exited with rc = 1. VINA Error: An internal error occurred in /home/armstrdj/projects/android/NDK_Build/android-ndk-r8c/samples/VINA-wcg/jni/coords.cpp(26). Please contact the author, Dr. Oleg Trott <ot14@columbia.edu>, so that this problem can be resolved. The reproducibility of the error may be vital, so please remember to include the following in your problem report: * the EXACT error message, * your version of the program, * the type of computer system you are running it on, * all command line options, * configuration file (if used), * ligand file as PDBQT, * receptor file as PDBQT, * flexible side chains file as PDBQT (if used), * output file as PDBQT (if any), * input (if possible), * random seed the program used (this is printed when the program starts). Thank you! Retrying task. [12:17:59] Starting task 4,CPU time is 4486.670000. [12:17:59] ./ZINC32930502.pdbqt size = 25 7 ../../projects/www.worldcommunitygrid.org/fahv.x3NF8_A_IN_LEDGF.pdbqt size = 2830 0 An internal error occurred in /home/armstrdj/projects/android/NDK_Build/android-ndk-r8c/samples/VINA-wcg/jni/coords.cpp(26). Please contact the author, Dr. Oleg Trott <ot14@columbia.edu>, so that this problem can be resolved. The reproducibility of the error may be vital, so please remember to include the following in your problem report: * the EXACT error message, * your version of the program, * the type of computer system you are running it on, * all command line options, * configuration file (if used), * ligand file as PDBQT, * receptor file as PDBQT, * flexible side chains file as PDBQT (if used), * output file as PDBQT (if any), * input (if possible), * random seed the program used (this is printed when the program starts). Thank you! [12:19:15] ERROR: VINA exited with rc = 1. VINA Error: An internal error occurred in /home/armstrdj/projects/android/NDK_Build/android-ndk-r8c/samples/VINA-wcg/jni/coords.cpp(26). Please contact the author, Dr. Oleg Trott <ot14@columbia.edu>, so that this problem can be resolved. The reproducibility of the error may be vital, so please remember to include the following in your problem report: * the EXACT error message, * your version of the program, * the type of computer system you are running it on, * all command line options, * configuration file (if used), * ligand file as PDBQT, * receptor file as PDBQT, * flexible side chains file as PDBQT (if used), * output file as PDBQT (if any), * input (if possible), * random seed the program used (this is printed when the program starts). Thank you! 12:19:15 (19693): called boinc_finish </stderr_txt> ]]>" |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Hello Randzo.
2 earlier reports about error 195 on 30 July 2013 are at https://secure.worldcommunitygrid.org/forums/...ead,35473_offset,0#428412 and at https://secure.worldcommunitygrid.org/forums/...ead,35465_offset,0#428365 which looks different but contains this line: "Tue Jul 30 12:07:39 EEST 2013|World Community Grid|[task] process exited with status 195" No fix yet, but thanks for helping us with your information. Lawrence |
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armstrdj
Former World Community Grid Tech Joined: Oct 21, 2004 Post Count: 695 Status: Offline Project Badges: ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Randzo,
No need to contact Dr. Trott. This is a bug in the checkpoint code we added for Android to take more frequent checkpoints. We are working on the fix. There is no real work around but the bug is more likely to occur the more times it is stopped and restarted. Thanks, armstrdj |
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Randzo
Senior Cruncher Slovakia Joined: Jan 10, 2008 Post Count: 339 Status: Offline Project Badges: ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
Thank you Lawrence and Armstrdj,
I googled "0xc3, -61" site:worldcommunitygrid.org and it hasn't found any results so I started a new thread with it as I thought it is unique issue. Thank you very much for your quick support, I'm very pleased with it! |
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