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steffen_moeller
Cruncher Joined: Dec 3, 2005 Post Count: 44 Status: Offline |
Hello,
if you don't already have an agreement with the some (extremely large) foundation or another generous donator, are you prepared to somehow transform your findings into a drug? I am asking since I ran into some individuals last week who presumed volunteer computing to endanger your IP rights on the compound you find since every contributor could possibly claim to have contributed to the finding. And with no (or an uncertain) protection, big pharma seems unlikely to adopt your compound to go through all the tremendously expensive clinical phases, right? Those (friendly!) folks are not contributing to FAAH for that reason. Could you please find some appropriate "lawyer speak" to convince them to join in? Many thanks Steffen |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Hello steffen_moeller,
The Scripps Research Institute has a vast number of relationships with many scientific institutions. I would not bother even guessing how many strings they could pull if they saw some reason to do so for the FightAids@Home project. Lawrence |
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Rickjb
Veteran Cruncher Australia Joined: Sep 17, 2006 Post Count: 666 Status: Offline Project Badges:
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I too have wondered about this, and find the information from WCG about it too vague and unsatisfying.
The question also applies to other WCG projects such as DDDT, flu, etc. Sorry, Lawrence, but your reply doesn't really help. What kind of organisation, private company, charity, governmental, inter-governmental or other, would come up with the funding to develop a successful drug that has weak or no intellectual property protection? Are there examples from the past?* As for the IP rights of us volunteer crunchers, I think we cancel those when we accept WCG's conditions that all research results must be placed in the public domain. It might be interesting to read some opinions on this topic from the legal advisors to WCG and/or the Scripps Institute. ------ * An acquaintance has managed to develop and market one or more drugs that are based on a generic compound. He may have obtained some IP protection from the way his therapeutic product is formulated, as well as the results of the tests and trials that he conducted. His is AFAIK a one-man or small partnership business. Not big pharma, not even micro-pharma, more like nano-pharma. I suppose I shoud ask his opinion on this question (!) |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Hi Rickjb ,
I hesitate to do the laundry list of intellectual property scams developed by lawyers since 1970. I will just point out that there are many obviously indefensible intellectual property positions out there that no one has ever been able to break. The only thing surprising to me is that almost every year someone will pop up on the board and start worrying that the pharmaceutical firms are about to lose their ability to protect their drugs. Last month I read an article that referred to quarter-billion dollar payments made by manufacturers to their 'competitors' - - apparently to ensure the right kind of 'competition'. I will leave you to expound on this potentially grave problem. [Big Grin] Lawrence |
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mgl_ALPerryman
FightAIDS@Home, GO Fight Against Malaria and OpenZika Scientist USA Joined: Aug 25, 2007 Post Count: 283 Status: Offline Project Badges:
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Hi Steffen,
On FightAIDS@Home we are searching for "hits" (i.e., fairly small, moderately potent compounds that could potentially be developed into much more potent "leads," which could potentially be further developed into actual drugs). For additional details on this process, see the last Volume of the FightAIDS@Home newsletter (Volume 7, I believe). For any promising "hits" that we discover on FAAH, we will publish the predicted structures and the data from follow-up "wet lab" experiments on these hits. Any interested members in the academic or industrial scientific community can then try to develop these hits into leads and then into drugs. We will also try to develop these hits into leads and then drugs at TSRI. But our main purpose is to discover new hits and to study how these hits work, in order to advance the basic science regarding the "structure-function" relationships that control (a) the potency of drugs against the normal, wild type versions of HIV and (b) the atomic mechanisms that allow drug-resistant mutant "super bugs" to evade the drugs. Although our central goals are to discover and characterize new hits in order to advance the structural understanding of drug resistance and to test and further develop tools that can be used by the entire drug discovery community to help fight many diseases, we will also try to optimize the hits we discover into leads (and then into drugs). To make sure that we preserve the "patentability" of any leads or drugs that we subsequently develop, we perform the iterative process of optimization and analysis on our local computers at TSRI. Thus, we share the data on the hits we discover on FAAH with the public, so that other scientists can use that knowledge to help advance the fight against HIV/AIDS, but we use our local, secure computers when we dock the new compounds that we design, based upon the data on those hits. If/when we develop a potent lead (that medicinal chemists could then optimize, in order to try to produce an actual drug), the general, well-established process is to patent the discovery first, and then to share all of the details with the public. Published, publicly-available data on hits is frequently used by corporations to help advance their discovery and development of actual drugs. The development of the HIV integrase drug called "raltegravir" is a recent example of this phenomenon. As pharmaceutical companies devote more and more of their "R & D" budgets to end-stage acquisition and development (and less and less of their budgets to the research part of R & D), scientists in the academic community need to pick up the slack and perform more and more of the research that advances the drug discovery process. It is certainly true that the Intellectual Property rights of potentially useful discoveries need to be protected (i.e., the patentability of discoveries needs to be preserved), or else useful discoveries will never be developed, mass produced, and delivered to patients. But sharing data on the hits discovered in the early stages of the drug discovery process will not impede the patentability of the leads and drugs developed from them. In fact, many pharmaceutical companies spend a lot of effort on "patent busting." Even though a current drug might be patented, if someone else can either (a) create a new, slightly different version of that drug that displays significant improvements in potency or (b) discover and demonstrate a new, previously unknown application of that drug, then they can still patent that new compound or that new "re-positioning" application. Thank you all very much for your help, Dr. Alex L. Perryman PS--If someone from the patent law community can either confirm or correct these statements, that would be helpful. Although I have experience with a provisional patent (from my graduate work at UCSD) and now a full patent application (from my first postdoctoral position at Caltech), I am certainly not a lawyer. By the way, that full patent application (on engineered antiviral lectins for the prevention and treatment of enveloped viruses, including HIV) should be posted to the USPTO database and, thus, available to the public in December. As soon as this patent is available on the USPTO database, I will summarize that project for you. |
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Rickjb
Veteran Cruncher Australia Joined: Sep 17, 2006 Post Count: 666 Status: Offline Project Badges:
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@ Dr Perryman:
Thank you very much for your carefully-written, very informative post on this issue. It answers many of my questions on the subject. I think a similar in-house process to develop WCG "hits" is in place for Prof Stan Watowich's DDDT/IADS group over at UTMB. Another WCG project which could eventually result in patentable products is CEP. I expect that analogous IP rights issues apply there, too. On the other hand, there are WCG projects which are unlikely to result directly in patentable products, but instead aim to build knowledge bases which might be used by future researchers in other steps of advancing knowledge, with any commercial applications much further away. In this category are HPF(2), NRW, HFCC, and perhaps HCC. Placing the results of such projects in the public domain is more clearly appropriate. I have thus made a distinction between WCG projects that are potentially closer to commercial applications versus those further away. The first group have similar potential IP issues, and I think that information like that in your post should be more prominent on the WCG website. A possible place for this would be the Overview section on the WCG Help page, which is accessible via the Help button. One of the questions there is "Are the results produced by World Community Grid part of a commercial venture?" Links to project-specific information as in your post above, and the page with the Heath Robinson -esq DDDT development flowchart, would also be useful. |
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Eric-Montreal
Cruncher Canada Joined: Nov 16, 2004 Post Count: 34 Status: Offline Project Badges:
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Dr. Perryman
Thanks for your very informative post, however, it reveals a problem in the way WCG presents itself. Namely, on the About Us page : "As part of our commitment to advancing human welfare, all results will be in the public domain and made public to the global research community." By reading it, we are misled to believe that, in exchange for using donated resources, **ALL** results derived from the projects will be donated to the public domain. If that was true, it would constitute prior art and prevent patenting of the active substances (or other results) isolated during research projects carried out using WCG, thus allowing low cost generic medication (or solar cells with the Clean Energy project) to be available much sooner. You now tell us there is an intermediate step where, before the data is released to the public domain, you will patent all the interesting results. Since, as part of the patent process, all data regarding the patent and it's claims must be made public, the additional donation to the public domain promised by WCG is only about the remaining results you consider not good enough to be worth patenting. Put more bluntly, a few years later, the leftovers will be dumped in the public domain. As a result, the main effect of our contribution is to lower your costs, but it will not result in any significant change in the availability of exploitable results in the public domain, and as a consequence, it will not enable lower cost, more accessible treatments, and it won't speed up the availability of generic drugs that would be required to stop this worldwide pandemic. It won't alter the overwhelmingly unbalanced weight of patent based pharmaceutical corporate profits and the little value put on human life, and even worse if those humans live in already poor nations. honestly, this is a big disappointment, even if I suspected there somehow was a twist in this seemingly altruistic way WCG present itself and the convoluted answers given in the past when the patent issue have been raised in these forums. The statement in the "About Us" page would be more fair and accurate if it included the sentence : "Researchers involved in the projects retain the right to patent the discoveries made using the World Community grid before the data is made public." However, thanks for making the whole process slightly more transparent. If I decide to keep participating, I will now do so in a more informed manner. ------ As pharmaceutical companies devote more and more of their "R & D" budgets to end-stage acquisition and development (and less and less of their budgets to the research part of R & D), scientists in the academic community need to pick up the slack and perform more and more of the research that advances the drug discovery process. Thanks for using quotes when talking about R&D and pharmaceutical companies. From a scientist, this is priceless ! Increasingly, their only "R&D" (what you call "end-stage acquisition and development") is about buying on the cheap exclusive rights to scientific research patents from publicly funded R&D institutions such as SCRIPPS (mostly from NIH grants) and then patenting all practical ways to use it to lock out their competitors and sell the drugs at the highest price the market will bear without consideration for the manufacturing cost or the emergency of the humanitarian situation. What they develop is mainly so called compound patents, that is the union of 2 or more elements that are either impossible to patent by themselves or already patented. The 10 years old frenzy about patenting (anything)+"on the internet" is a good illustration. In pharmaceutical industry "R&D", that means combining the active substance + (in a pill, in a gel, in a syrup, in child dose, in injectable solution, in combination with another active ingredient, etc ...) Those are very low value added patents, but they are the ones reaping indecent financial reward. This is not new. SCRIPPS (but it's an industry wide issue) already found itself in an intense controversy regarding this issue 15 years ago : Scripps' Latest Deal Sparks Debate Those patent based pharmaceutical mammoths are increasingly becoming as irrelevant middlemen in the drug elaboration process as record labels are in the distribution of music, except, in the case of drugs, we're talking about life and death. Just like record labels are lobbying hard to expand copyright with legal tools such as DMCA, the pharmaceutical lobby can be expected to increasingly resort to hardball tactics to maintain their patent based privileges. However, in some countries, a backlash is starting to occur, due to the unwillingness of the pharmaceutical industry to do any significant effort and the emergency created by the massive death toll and the need to react fast to the worst pandemic in mankind history : Brazil breaks patent on HIV/AIDS drug It is certainly true that the Intellectual Property rights of potentially useful discoveries need to be protected (i.e., the patentability of discoveries needs to be preserved), or else useful discoveries will never be developed, mass produced, and delivered to patients. Generic pharmaceutical companies do not rely primarily on patents, yet they do at least as much "r&d" as patent based ones, and they make a handsome profit. One example, here in Canada is Apotex, with it's CEO being the #10 richest Canadian, and the 2nd highest pharmaceutical "R&D" budget in the country. Yet, they can sell "APO-TRIAVIR", their generic HIV treatment in Rwanda for 38 cents a day, while the same active substances are sold domestically for more than 50$ a day (131x more). http://www.apotex.com/apotriavir/default.asp Patents are not needed to yield good ROI and healthy profits, however, they are absolutely required to make the indecent level of profit the Patent based pharmaceutical industry is having right now. For HIV drugs, we're talking at least 25000% profit, a cost to end user price ratio of more than 250:1 If car manufacturers had the same profit level, an average familly car would cost 1M$ ! A very informative page about generic HIV treatment, the issues & costs can be found here : http://www.avert.org/generic.htm With so much money floating around, scientists at the core of this business should get paid accordingly. Instead, you are requesting computer time donations from us because your financing is too low, while those using the results of your work and the work of your colleagues are reaping billions in profits, allocating you as little as they need to keep scientific progress on a short leash. Is this the best way to achieve scientific progress and new discoveries ? Is it the best way to attract the brightest students ? Once scientists have isolated the active substance, putting it in a pill is trivial. Why don't publicly funded institutions like SCRIPPS go the proverbial "extra mile", all the way to the final pill patents and be the ones who subcontract their manufacture & distribution instead of being used as cheap labour paid largely with taxpayer's money by the pharmaceutical industry ? Even within the current patent system, there are models that prevent those abuses, such as the RAND (Reasonable and non discriminatory) model designed to allow a level playing field and fair competition between manufacturers. In fact, many pharmaceutical companies spend a lot of effort on "patent busting." Sharks eating sharks. I would be curious to know the ratio of scientists versus lawyers and it's evolution in recent years at Pfizer, GlaxoSmithKline, Bayer, etc ... (a) create a new, slightly different version of that drug that displays significant improvements in potency or (b) discover and demonstrate a new, previously unknown application of that drug, then they can still patent that new compound or that new "re-positioning" application. What you describe is the frowned upon practice known as "Evergreening", specifically designed to prevent drugs whose patent is about to expire from entering the public domain by adding mostly frivolous new claims, or, much worse, intentionally delaying improvements to existing drugs and only releasing them years later, when the original patent is about to expire, even if this delay is known to cause harm to the patients. Some techniques used for evergreening : http://www.egagenerics.com/gen-evergrn.htm Feel free to correct me if I got anything wrong. |
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mgl_ALPerryman
FightAIDS@Home, GO Fight Against Malaria and OpenZika Scientist USA Joined: Aug 25, 2007 Post Count: 283 Status: Offline Project Badges:
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Hello Eric-Montreal,
----------------------------------------Please forgive me for being unclear and allow me to correct a significant misunderstanding. All of the results of the calculations performed on FightAIDS@Home's section of the World Community Grid are available to the public (not just the leftovers). Upon request, we share the original, unfiltered results and/or the "processed results" (i.e., the numerical data obtained after clustering the data from the 100 to 150 runs that are performed for each ligand:protein docking job) of each experiment with other scientists. We have already shared some of the original and clustered results of the early FAAH experiments with another scientist at an academic institution (for free), because she requested a copy. If other scientists want the results of any FAAH experiments, they just have to ask us. We do not have the capacity to post all of the results to our FAAH webpage, since we are talking about several TB of data (i.e., even when the data is heavily compressed). But upon request, we share the data with other researchers for free. We also share our modeling tools and research strategies with other labs for free. And unlike most other scientists, we actually reveal the nature of our current and future experiments on the "Status" page of the FightAIDS@Home site. The compounds that perform the best in these docking calculations on FightAIDS@Home (i.e., the "hits" to which I was referring) are ordered and evaluated by our collaborators in "wet lab" experiments at TSRI. If the subsequent rounds of experimental testing produce promising results, then all of the structural and experimental data on these hits will be published (and, thus, available to the public via PubMed). The "hits" that we have discovered thus far while I have been managing the day-to-day operations of FAAH failed the first or second round of preliminary "wet lab" assays, which means that they are not really publishable in a peer-reviewed journal. However, I will disclose the full details of these particular hits in the next volume of the FAAH newsletter. If these hits had performed well in the wet lab assays, then we would write a paper on these compounds and submit it for publication. It tends to take a few months to write such a manuscript, and then it takes a few more months for it to be peer reviewed and edited (if it was accepted for publication). The only real advantage we have over other AIDS researchers is that we have access to the data on these promising hits for the months that it takes to get the paper published. Anyone who reads the paper can then try to develop these "hits" into "leads" in their own labs. We are not trying to conceal the good data and just reveal the garbage. As a scientist in academia, that notion is rather insulting. It just takes time to process the results, filter out the best-performing compounds, visually analyze the docking results in detail, order the best compounds, and then have those compounds tested. We will not try to patent the "hits" before sharing data on them with the public. If the follow-up assays provide promising results, then we will try to publish the data on the hits before disclosing the details on the FAAH site or Forum. These resulting publications are available to the public via PubMed. Of the hits that we are able to publish, we will try to develop some of them into "leads" by changing some of their atoms, adding new functional groups, and linking different regions of different hits together, to try to create new compounds that are ~ 1,000 to 1,000,000 fold more potent. This "hit-to-lead" optimization process tends to drastically change the size, shape, flexibility, and composition of the ligand (i.e., leads are very different chemical entities than the hits from which they were developed or inspired). The hits are identified in the results of the FightAIDS@Home experiments on the WCG, and the data on the hits are shared with the public. But the hit-to-lead optimization process is an entirely different stage of the drug discovery process, and none of this optimization stage occurs on the WCG for FAAH. Since we will publish the data on the promising hits, other scientists can try to develop them into their own leads. We hope that they do, since the global community needs as many new leads against HIV as possible, due to the increasing prevalence of drug-resistant "super bugs" (and the fact that most leads fail during clinical trials, often due to toxicity issues). In summary, the promising "hits" will all be revealed to the public (as soon as we can confirm their potential in follow-up wet lab experiments and then write a paper on the discovery). The hits are not patentable, as far as I know. If we or any other lab can optimize these millimolar to micromolar affinity "hits" into low nanomolar affinity "leads," then the leads might be patentable. The WCG was not trying to mislead anyone, and neither was I. I should have been more clear about the differences between "hits" and "leads." My bad. Best wishes, Dr. Alex L. Perryman [Edit 2 times, last edit by mgl_ALPerryman at Oct 28, 2009 9:50:09 PM] |
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nasher
Veteran Cruncher USA Joined: Dec 2, 2005 Post Count: 1423 Status: Offline Project Badges:
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i am so happy that you explained all of this to me... makes me glad to be here and doing my part... mind you i have only completed 1 year towards fightAids so far but it lets me see behind the jargon and the actual reserch leads me to more hope for people with Aids as well as other diseases.
----------------------------------------- to the people who dont think they are being fair: remember the scientists have to be able to make a profit of some sort or at least pay the bills. and if i had a few spair terabits of free space on hard drives i might also ask for the data to quench my curiosity but unfortunatly i dont have the data space or really the reason to ask eithor. good luck and please keep those posts comming Dr. Alex L. Perryman they help me at least V/R Nasher ![]() |
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Former Member
Cruncher Joined: May 22, 2018 Post Count: 0 Status: Offline |
Thanks Dr. Perryman for the very detailed explanation of the process.
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