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successful Boinc new install (Linux) dies

Hello,

The saga continues. I have a clean SuSE 10.3 install. I then installed the latest Boinc software in the following way:

Download into home directory.
Using a file manager I checked the "executable" box in the icon's properties.
I double clicked.
Instantly, a Boinc directory appeared in my home directory.
I created an icon on the desktop and linked it to the Run_Manager script.
I checked the "executable" box in the icon's properties.
I clicked on the Run_Manager icon and lo and behold, the manager programme began to run. I selected WCG as my source. Files were downloaded, and everything seemed to work.

I returned to my computer this morning to find the screensaver had kicked in. When I signed in, the Boinc manager reported it was unable to locate host. There was nothing in messages, and no projects attached.

I could not attach to localhost (even with password). So, I shut everything down and restarted my machine. I have not been able to restart manager. There is no WCG process in my KDE systems monitor.

I checked stdoutdae.txt and there had been some work done but zero reported.

Any thoughts?
[Feb 10, 2008 12:15:17 AM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: successful Boinc new install (Linux) dies

Hi, Mark.

You seem to be having nothing but problems, for which I am most regretful.

However, this particular problem you describe sounds a lot like your earlier problem.

Please will you bear with me and let me step you through some troubleshooting?

To start with, I would like you to open a terminal window and type

cd boinc
ls -l

Then paste the output into a post.

Thank you.
[Feb 10, 2008 1:57:40 AM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: successful Boinc new install (Linux) dies

Hi, Didact., many thanks for the reply and kind offer of help. Here is the output (and I note that the batch files belong to root. Yet, the run manager file worked initially. Humm). Would it be useful to produce the text of the stdoutdae.txt file?

Thanks, Didactylos (what is your real name? ("Who was that masked man?")),

Mark

============= Start list output ============

heseltine@SuSE-103-2ndFeb08:~> cd BOINC
heseltine@SuSE-103-2ndFeb08:~/BOINC> ls -l
total 8760
-rw-r--r-- 1 heseltine users 2072 2008-02-08 20:20 account_www.worldcommunit
ygrid.org.xml
-rw-r--r-- 1 heseltine users 14667 2008-02-08 20:19 all_projects_list.xml
-rw-r--r-- 1 heseltine 1000 219 2007-11-01 10:20 binstall.sh
-rwxr-xr-x 1 heseltine 1000 1692420 2007-11-01 10:20 boinc
-rwxr-xr-x 1 heseltine 1000 216680 2007-11-01 10:20 boinc_cmd
-rwxr-xr-x 1 heseltine 1000 6270240 2007-11-01 10:20 boincmgr
-rw-r--r-- 1 heseltine 1000 815 2007-11-01 10:20 boincmgr.16x16.png
-rw-r--r-- 1 heseltine 1000 2395 2007-11-01 10:20 boincmgr.32x32.png
-rw-r--r-- 1 heseltine 1000 5570 2007-11-01 10:20 boincmgr.48x48.png
-rw-r--r-- 1 heseltine 1000 238100 2007-11-01 10:20 ca-bundle.crt
-rw-r--r-- 1 heseltine users 75023 2008-02-09 16:07 client_state_prev.xml
-rw-r--r-- 1 heseltine users 75023 2008-02-09 16:07 client_state.xml
-rw-r--r-- 1 heseltine users 5146 2008-02-08 20:20 get_current_version.xml
-rw-r--r-- 1 heseltine users 580 2008-02-08 20:19 get_project_config.xml
-rw-r--r-- 1 heseltine users 1200 2008-02-08 20:20 global_prefs.xml
-rw------- 1 heseltine users 32 2008-02-08 20:19 gui_rpc_auth.cfg
-rw-r--r-- 1 heseltine users 185 2008-02-09 08:26 job_log_www.worldcommunit ygrid.org.txt
drwxr-xr-x 38 heseltine 1000 4096 2007-11-01 10:20 locale
-rw-r--r-- 1 heseltine users 66 2008-02-09 16:07 lockfile
-rw-r--r-- 1 heseltine users 142 2008-02-08 20:20 lookup_account.xml
-rw-r--r-- 1 heseltine users 33232 2008-02-08 20:20 master_www.worldcommunity grid.org.xml
drwxrwx--x 3 heseltine users 4096 2008-02-08 20:20 projects
-rwxr-xr-x 1 root root 46 2008-02-08 19:58 run_client
-rwxr-xr-x 1 root root 49 2008-02-08 19:58 run_manager
-rw-r--r-- 1 heseltine users 23487 2008-02-09 03:53 sched_reply_www.worldcomm unitygrid.org.xml
-rw-r--r-- 1 heseltine users 6723 2008-02-09 03:53 sched_request_www.worldco mmunitygrid.org.xml
drwxrwx--x 4 heseltine users 4096 2008-02-08 20:22 slots
-rw-r--r-- 1 heseltine users 425 2008-02-09 03:53 statistics_www.worldcommu nitygrid.org.xml
-rw-r--r-- 1 heseltine users 0 2008-02-08 20:19 stderrdae.txt
-rw-r--r-- 1 heseltine users 62008 2008-02-09 16:07 stdoutdae.txt
-rw-r--r-- 1 heseltine users 1434 2008-02-09 16:07 time_stats_log
heseltine@SuSE-103-2ndFeb08:~/BOINC>

============== end list output ============
[Feb 10, 2008 5:50:53 AM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: successful Boinc new install (Linux) dies

I suspect that by installing by double clicking, your shell automatically ran the script as root.

Rather than trying an unsafe workaround, I recommend you delete the scripts owned by root and then expand the original file again. This time, do it from the terminal according to these instructions: http://www.worldcommunitygrid.org/reg/ms/viewThankYouAll.do?platformPick=linux

(making sure you are acting as the user that will normally be running BOINC.) If you leave all the rest of the files untouched, you won't need to reattach or lose any work in progress.

Alternatively: if all this sounds too complicated, just delete the boinc directory and start again.
[Feb 10, 2008 7:18:26 AM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: successful Boinc new install (Linux) dies

Hello,

I assume the same result could be achieved by more simply changing the permissions to user/group rather than root.

At any rate, I did as suggested. I confirmed the two script files no longer belonged to root. I created a new shortcut icon to run manager, and the boinc manager appeared but could not attach to any project.

I deleted the boinc directory and reinstalled boinc using a terminal session, again using the WCG suggested steps. However, instead of running run-manager in a terminal session, I started it via a new desktop icon (as I do not want a terminal session hanging about), selected WCG as my project, and connected to my WCG account. Files were downloaded and are running.

To test the system, I suspended work, and restarted the machine. I then restarted boinc manager using the icon and resumed the work. KDE's system monitor shows only the current session and no phantom sessions running. So far so good.

However, the real test will be when I leave the machine alone for a day or two and the project work/upload/download cycle runs as appropriate.

Mark
[Feb 10, 2008 4:26:55 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: successful Boinc new install (Linux) dies

It may have had the same result, but the scripts are generated dynamically, and I wanted to avoid any unexpected sideeffects (and I didn't have time to check it myself). So, I gave you a solution I was sure should work.
[Feb 10, 2008 7:15:48 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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Re: successful Boinc new install (Linux) dies

Understood and nice to know.

I should know by tomorrow whether there are any problems with this set up. I hope there are no problems. Although this rather long experience has taught me quite a bit about Linux (even to the point I have been able to install Lotus Notes and other programmes and maybe WCG), I still feel like a monkey as I can only glean a sense of the 'why' and 'how things work'. I do wish there was a handy reference manual to explain how WCG works in respect of Linux. My next step is to figure out a script that will start run-manager automatically whenever Linux starts.

Anyway, many thanks for the kind help.

Mark
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Re: successful Boinc new install (Linux) dies

Woke up this morning to find the following message displayed:

"Boinc Manager - connection failed. Boinc manager is not able to connect to a boinc client. Would you like to try to connect again?"

I click yes, and the same message reappears. So, it would seem that the ownership of the scripts and the original method of installation were not the cause. There is something else going on here.

The complete stdoutdae.txt reports is attached. Interestingly, the KDE System Guard reports very strangely - I will attach it if I can copy it.

Mark

============= Begin stdoutdae.txt ================

10-Feb-2008 08:56:03 [---] Starting BOINC client version 5.10.28 for i686-pc-linux-gnu
10-Feb-2008 08:56:03 [---] log flags: task, file_xfer, sched_ops
10-Feb-2008 08:56:03 [---] Libraries: libcurl/7.17.1 OpenSSL/0.9.8g zlib/1.2.3
10-Feb-2008 08:56:03 [---] Data directory: /home/heseltine/BOINC
10-Feb-2008 08:56:03 [---] Processor: 2 GenuineIntel Intel(R) Pentium(R) 4 CPU 3.20GHz [Family 15 Model 4 Stepping 1]
10-Feb-2008 08:56:03 [---] Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe constant_tsc pni monitor ds_cpl cid xtpr
10-Feb-2008 08:56:03 [---] OS: Linux: 2.6.22.16-0.1-default
10-Feb-2008 08:56:03 [---] Memory: 979.38 MB physical, 2.01 GB virtual
10-Feb-2008 08:56:03 [---] Disk: 436.77 GB total, 414.29 GB free
10-Feb-2008 08:56:03 [---] Local time is UTC -7 hours
10-Feb-2008 08:56:03 [---] No general preferences found - using BOINC defaults
10-Feb-2008 08:56:03 [---] Preferences limit memory usage when active to 489.69MB
10-Feb-2008 08:56:03 [---] Preferences limit memory usage when idle to 881.44MB
10-Feb-2008 08:56:03 [---] Preferences limit disk usage to 9.31GB
10-Feb-2008 08:56:03 [---] This computer is not attached to any projects
10-Feb-2008 08:56:03 [---] Visit http://boinc.berkeley.edu for instructions
10-Feb-2008 08:56:34 [---] Fetching configuration file from http://www.worldcommunitygrid.org/get_project_config.php
10-Feb-2008 08:56:55 [---] Running CPU benchmarks
10-Feb-2008 08:56:55 [---] Suspending computation - running CPU benchmarks
10-Feb-2008 08:57:03 [World Community Grid] Master file download succeeded
10-Feb-2008 08:57:08 [World Community Grid] Sending scheduler request: Project initialization. Requesting 1 seconds of work, reporting 0 completed tasks
10-Feb-2008 08:57:14 [World Community Grid] Scheduler request succeeded: got 1 new tasks
10-Feb-2008 08:57:14 [---] General prefs: from World Community Grid (last modified 28-Nov-2007 21:09:23)
10-Feb-2008 08:57:14 [---] Host location: none
10-Feb-2008 08:57:14 [---] General prefs: using your defaults
10-Feb-2008 08:57:14 [---] Preferences limit memory usage when active to 979.38MB
10-Feb-2008 08:57:14 [---] Preferences limit memory usage when idle to 979.38MB
10-Feb-2008 08:57:14 [---] Preferences limit disk usage to 9.31GB
10-Feb-2008 08:57:16 [World Community Grid] Started download of wcg_hpf2_rosetta_5.20_i686-pc-linux-gnu
10-Feb-2008 08:57:16 [World Community Grid] Started download of hpf2_5.20_lin_paths.txt
10-Feb-2008 08:57:17 [World Community Grid] Finished download of hpf2_5.20_lin_paths.txt
10-Feb-2008 08:57:17 [World Community Grid] Started download of hpf2.avgE_from_pdb.gz
10-Feb-2008 08:57:20 [World Community Grid] Finished download of hpf2.avgE_from_pdb.gz
10-Feb-2008 08:57:20 [World Community Grid] Started download of hpf2.Paa_n.gz
10-Feb-2008 08:57:22 [World Community Grid] Finished download of hpf2.Paa_n.gz
10-Feb-2008 08:56:55 [---] Running CPU benchmarks
10-Feb-2008 08:56:55 [---] Running CPU benchmarks
10-Feb-2008 08:57:22 [World Community Grid] Started download of hpf2.plane_data_table_1015.dat.gz
10-Feb-2008 08:57:26 [---] Benchmark results:
10-Feb-2008 08:57:26 [---] Number of CPUs: 2
10-Feb-2008 08:57:26 [---] 973 floating point MIPS (Whetstone) per CPU
10-Feb-2008 08:57:26 [---] 1550 integer MIPS (Dhrystone) per CPU
10-Feb-2008 08:57:27 [---] Resuming computation
10-Feb-2008 08:57:28 [World Community Grid] Finished download of hpf2.plane_data_table_1015.dat.gz
10-Feb-2008 08:57:28 [World Community Grid] Started download of hpf2.bbdep02.May.sortlib.gz
10-Feb-2008 08:58:14 [World Community Grid] Finished download of wcg_hpf2_rosetta_5.20_i686-pc-linux-gnu
10-Feb-2008 08:58:14 [World Community Grid] Started download of hpf2.Paa_pp.gz
10-Feb-2008 08:58:20 [World Community Grid] Finished download of hpf2.Paa_pp.gz
10-Feb-2008 08:58:20 [World Community Grid] Started download of hpf2.Rama_smooth_dyn.dat_ss_6.4.gz
10-Feb-2008 08:58:29 [World Community Grid] Finished download of hpf2.Rama_smooth_dyn.dat_ss_6.4.gz
10-Feb-2008 08:58:29 [World Community Grid] Started download of hpf2.sasa_prob_cdf.txt.gz
10-Feb-2008 08:58:30 [World Community Grid] Finished download of hpf2.bbdep02.May.sortlib.gz
10-Feb-2008 08:58:30 [World Community Grid] Started download of hpf2.paircutoffs.gz
10-Feb-2008 08:58:31 [World Community Grid] Finished download of hpf2.sasa_prob_cdf.txt.gz
10-Feb-2008 08:58:31 [World Community Grid] Finished download of hpf2.paircutoffs.gz
10-Feb-2008 08:58:31 [World Community Grid] Started download of hpf2.SASA-angles.dat.gz
10-Feb-2008 08:58:31 [World Community Grid] Started download of hpf2.SASA-masks.dat.gz
10-Feb-2008 08:58:33 [World Community Grid] Finished download of hpf2.SASA-angles.dat.gz
10-Feb-2008 08:58:33 [World Community Grid] Finished download of hpf2.SASA-masks.dat.gz
10-Feb-2008 08:58:33 [World Community Grid] Started download of hpf2.pdbpairstats_fine.gz
10-Feb-2008 08:58:33 [World Community Grid] Started download of hpf2.sasa_offsets.txt.gz
10-Feb-2008 08:58:36 [World Community Grid] Finished download of hpf2.pdbpairstats_fine.gz
10-Feb-2008 08:58:36 [World Community Grid] Finished download of hpf2.sasa_offsets.txt.gz
10-Feb-2008 08:58:36 [World Community Grid] Started download of hpf2.phi.theta.36.HS.resmooth.gz
10-Feb-2008 08:58:36 [World Community Grid] Started download of hpf2.Paa.gz
10-Feb-2008 08:58:37 [World Community Grid] Finished download of hpf2.Paa.gz
10-Feb-2008 08:58:37 [World Community Grid] Started download of hpf2.phi.theta.36.SS.resmooth.gz
10-Feb-2008 08:58:38 [World Community Grid] Finished download of hpf2.phi.theta.36.HS.resmooth.gz
10-Feb-2008 08:58:38 [World Community Grid] Finished download of hpf2.phi.theta.36.SS.resmooth.gz
10-Feb-2008 08:58:38 [World Community Grid] Started download of ln370-379_ln377.fasta.gz
10-Feb-2008 08:58:38 [World Community Grid] Started download of ln370-379_ln377.psipred.gz
10-Feb-2008 08:58:39 [World Community Grid] Finished download of ln370-379_ln377.fasta.gz
10-Feb-2008 08:58:39 [World Community Grid] Finished download of ln370-379_ln377.psipred.gz
10-Feb-2008 08:58:39 [World Community Grid] Started download of ln370-379_ln377.psipred_ss2.gz
10-Feb-2008 08:58:39 [World Community Grid] Started download of ln370-379_aaln37703_05.075_v1_3.gz
10-Feb-2008 08:58:40 [World Community Grid] Finished download of ln370-379_ln377.psipred_ss2.gz
10-Feb-2008 08:58:40 [World Community Grid] Started download of ln370-379_aaln37709_05.075_v1_3.gz
10-Feb-2008 08:58:42 [World Community Grid] Finished download of ln370-379_aaln37703_05.075_v1_3.gz
10-Feb-2008 08:58:42 [World Community Grid] Started download of stat_v01.png
10-Feb-2008 08:58:45 [World Community Grid] Finished download of stat_v01.png
10-Feb-2008 08:58:45 [World Community Grid] Started download of default_00_v01.gif
10-Feb-2008 08:58:46 [World Community Grid] Finished download of ln370-379_aaln37709_05.075_v1_3.gz
10-Feb-2008 08:58:46 [World Community Grid] Finished download of default_00_v01.gif
10-Feb-2008 08:58:46 [World Community Grid] Started download of dddt_00_v01.gif
10-Feb-2008 08:58:46 [World Community Grid] Started download of dddt_01_v01.png
10-Feb-2008 08:58:47 [World Community Grid] Finished download of dddt_00_v01.gif
10-Feb-2008 08:58:47 [World Community Grid] Finished download of dddt_01_v01.png
10-Feb-2008 08:58:47 [World Community Grid] Started download of dddt_02_v01.png
10-Feb-2008 08:58:47 [World Community Grid] Started download of dddt_03_v01.png
10-Feb-2008 08:58:47 [World Community Grid] Starting ln377_00005_4
10-Feb-2008 08:58:47 [World Community Grid] Starting task ln377_00005_4 using hpf2 version 520
10-Feb-2008 08:58:49 [World Community Grid] Finished download of dddt_02_v01.png
10-Feb-2008 08:58:49 [World Community Grid] Finished download of dddt_03_v01.png
10-Feb-2008 08:58:49 [World Community Grid] Started download of dddt_04_v01.png
10-Feb-2008 08:58:49 [World Community Grid] Started download of dddt_05_v01.png
10-Feb-2008 08:58:49 [World Community Grid] Sending scheduler request: To fetch work. Requesting 25920 seconds of work, reporting 0 completed tasks
10-Feb-2008 08:58:50 [World Community Grid] Finished download of dddt_04_v01.png
10-Feb-2008 08:58:50 [World Community Grid] Started download of faah_00_v01.gif
10-Feb-2008 08:58:51 [World Community Grid] Finished download of dddt_05_v01.png
10-Feb-2008 08:58:51 [World Community Grid] Finished download of faah_00_v01.gif
10-Feb-2008 08:58:51 [World Community Grid] Started download of faah_01_v02.gif
10-Feb-2008 08:58:51 [World Community Grid] Started download of faah_02_v02.gif
10-Feb-2008 08:58:52 [World Community Grid] Finished download of faah_01_v02.gif
10-Feb-2008 08:58:52 [World Community Grid] Finished download of faah_02_v02.gif
10-Feb-2008 08:58:52 [World Community Grid] Started download of faah_03_v02.gif
10-Feb-2008 08:58:52 [World Community Grid] Started download of faah_04_v02.gif
10-Feb-2008 08:58:53 [World Community Grid] Finished download of faah_03_v02.gif
10-Feb-2008 08:58:53 [World Community Grid] Finished download of faah_04_v02.gif
10-Feb-2008 08:58:53 [World Community Grid] Started download of hpf2_00_v01.gif
10-Feb-2008 08:58:53 [World Community Grid] Started download of hpf2_01_v01.gif
10-Feb-2008 08:58:55 [World Community Grid] Finished download of hpf2_00_v01.gif
10-Feb-2008 08:58:55 [World Community Grid] Finished download of hpf2_01_v01.gif
10-Feb-2008 08:58:55 [World Community Grid] Started download of hpf2_02_v01.png
10-Feb-2008 08:58:55 [World Community Grid] Started download of hpf2_03_v01.png
10-Feb-2008 08:58:55 [World Community Grid] Scheduler request succeeded: got 1 new tasks
10-Feb-2008 08:58:56 [World Community Grid] Finished download of hpf2_02_v01.png
10-Feb-2008 08:58:56 [World Community Grid] Finished download of hpf2_03_v01.png
10-Feb-2008 08:58:56 [World Community Grid] Started download of hpf2_04_v01.png
10-Feb-2008 08:58:56 [World Community Grid] Started download of hpf2_05_v01.png
10-Feb-2008 08:58:57 [World Community Grid] Finished download of hpf2_04_v01.png
10-Feb-2008 08:58:57 [World Community Grid] Finished download of hpf2_05_v01.png
10-Feb-2008 08:58:57 [World Community Grid] Started download of hpf2_06_v01.png
10-Feb-2008 08:58:57 [World Community Grid] Started download of hpf2_07_v01.png
10-Feb-2008 08:58:58 [World Community Grid] Finished download of hpf2_06_v01.png
10-Feb-2008 08:58:58 [World Community Grid] Finished download of hpf2_07_v01.png
10-Feb-2008 08:58:58 [World Community Grid] Started download of hpf2_08_v01.png
10-Feb-2008 08:58:58 [World Community Grid] Started download of acah_00_v01.gif
10-Feb-2008 08:58:59 [World Community Grid] Finished download of hpf2_08_v01.png
10-Feb-2008 08:58:59 [World Community Grid] Finished download of acah_00_v01.gif
10-Feb-2008 08:58:59 [World Community Grid] Started download of acah_01_v01.gif
10-Feb-2008 08:58:59 [World Community Grid] Started download of acah_03_v01.gif
10-Feb-2008 08:59:00 [World Community Grid] Finished download of acah_01_v01.gif
10-Feb-2008 08:59:00 [World Community Grid] Finished download of acah_03_v01.gif
10-Feb-2008 08:59:00 [World Community Grid] Started download of acah_04_v01.gif
10-Feb-2008 08:59:00 [World Community Grid] Started download of acah_05_v01.gif
10-Feb-2008 08:59:01 [World Community Grid] Finished download of acah_04_v01.gif
10-Feb-2008 08:59:01 [World Community Grid] Finished download of acah_05_v01.gif
10-Feb-2008 08:59:01 [World Community Grid] Started download of acah_06_v01.gif
10-Feb-2008 08:59:01 [World Community Grid] Started download of acah_07_v01.gif
10-Feb-2008 08:59:02 [World Community Grid] Finished download of acah_06_v01.gif
10-Feb-2008 08:59:02 [World Community Grid] Finished download of acah_07_v01.gif
10-Feb-2008 08:59:02 [World Community Grid] Started download of acah_02_v02.gif
10-Feb-2008 08:59:02 [World Community Grid] Started download of hcc1_00_v01.gif
10-Feb-2008 08:59:03 [World Community Grid] Finished download of acah_02_v02.gif
10-Feb-2008 08:59:03 [World Community Grid] Finished download of hcc1_00_v01.gif
10-Feb-2008 08:59:03 [World Community Grid] Started download of hcc1_01_v01.gif
10-Feb-2008 08:59:03 [World Community Grid] Started download of hcc1_02_v01.gif
10-Feb-2008 08:59:04 [World Community Grid] Finished download of hcc1_01_v01.gif
10-Feb-2008 08:59:04 [World Community Grid] Started download of hcc1_03_v01.gif
10-Feb-2008 08:59:05 [World Community Grid] Finished download of hcc1_02_v01.gif
10-Feb-2008 08:59:05 [World Community Grid] Finished download of hcc1_03_v01.gif
10-Feb-2008 08:59:05 [World Community Grid] Started download of hcc1_04_v01.gif
10-Feb-2008 08:59:05 [World Community Grid] Started download of hcc1_05_v01.gif
10-Feb-2008 08:59:06 [World Community Grid] Finished download of hcc1_04_v01.gif
10-Feb-2008 08:59:06 [World Community Grid] Finished download of hcc1_05_v01.gif
10-Feb-2008 08:59:06 [World Community Grid] Started download of hcc1_06_v01.gif
10-Feb-2008 08:59:06 [World Community Grid] Started download of ln370-379_ln376.fasta.gz
10-Feb-2008 08:59:07 [World Community Grid] Finished download of hcc1_06_v01.gif
10-Feb-2008 08:59:07 [World Community Grid] Finished download of ln370-379_ln376.fasta.gz
10-Feb-2008 08:59:07 [World Community Grid] Started download of ln370-379_ln376.psipred.gz
10-Feb-2008 08:59:07 [World Community Grid] Started download of ln370-379_ln376.psipred_ss2.gz
10-Feb-2008 08:59:08 [World Community Grid] Finished download of ln370-379_ln376.psipred.gz
10-Feb-2008 08:59:08 [World Community Grid] Finished download of ln370-379_ln376.psipred_ss2.gz
10-Feb-2008 08:59:08 [World Community Grid] Started download of ln370-379_aaln37603_05.075_v1_3.gz
10-Feb-2008 08:59:08 [World Community Grid] Started download of ln370-379_aaln37609_05.075_v1_3.gz
10-Feb-2008 08:59:16 [World Community Grid] Finished download of ln370-379_aaln37603_05.075_v1_3.gz
10-Feb-2008 08:59:19 [World Community Grid] Finished download of ln370-379_aaln37609_05.075_v1_3.gz
10-Feb-2008 08:59:20 [World Community Grid] Starting ln376_00104_9
10-Feb-2008 08:59:20 [World Community Grid] Starting task ln376_00104_9 using hpf2 version 520
10-Feb-2008 09:09:04 [---] Received signal 1
10-Feb-2008 09:09:05 [---] Exit requested by user
10-Feb-2008 09:10:04 [---] Starting BOINC client version 5.10.28 for i686-pc-linux-gnu
10-Feb-2008 09:10:04 [---] log flags: task, file_xfer, sched_ops
10-Feb-2008 09:10:04 [---] Libraries: libcurl/7.17.1 OpenSSL/0.9.8g zlib/1.2.3
10-Feb-2008 09:10:04 [---] Data directory: /home/heseltine/BOINC
10-Feb-2008 09:10:04 [---] Processor: 2 GenuineIntel Intel(R) Pentium(R) 4 CPU 3.20GHz [Family 15 Model 4 Stepping 1]
10-Feb-2008 09:10:04 [---] Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe constant_tsc pni monitor ds_cpl cid xtpr
10-Feb-2008 09:10:04 [---] OS: Linux: 2.6.22.16-0.1-default
10-Feb-2008 09:10:04 [---] Memory: 979.38 MB physical, 2.01 GB virtual
10-Feb-2008 09:10:04 [---] Disk: 436.77 GB total, 414.27 GB free
10-Feb-2008 09:10:04 [---] Local time is UTC -7 hours
10-Feb-2008 09:10:04 [World Community Grid] URL: http://www.worldcommunitygrid.org/; Computer ID: 494740; location: (none); project prefs: default
10-Feb-2008 09:10:04 [---] General prefs: from World Community Grid (last modified 28-Nov-2007 21:09:23)
10-Feb-2008 09:10:04 [---] Host location: none
10-Feb-2008 09:10:04 [---] General prefs: using your defaults
10-Feb-2008 09:10:04 [---] Preferences limit memory usage when active to 979.38MB
10-Feb-2008 09:10:04 [---] Preferences limit memory usage when idle to 979.38MB
10-Feb-2008 09:10:04 [---] Preferences limit disk usage to 9.31GB
10-Feb-2008 09:10:15 [World Community Grid] Restarting task ln377_00005_4 using hpf2 version 520
10-Feb-2008 09:10:15 [World Community Grid] Restarting task ln376_00104_9 using hpf2 version 520
10-Feb-2008 15:37:47 [World Community Grid] Sending scheduler request: To fetch work. Requesting 41 seconds of work, reporting 0 completed tasks
10-Feb-2008 15:37:52 [World Community Grid] Scheduler request succeeded: got 1 new tasks
10-Feb-2008 15:37:54 [World Community Grid] Started download of ln380-389_ln388.fasta.gz
10-Feb-2008 15:37:54 [World Community Grid] Started download of ln380-389_ln388.psipred.gz
10-Feb-2008 15:37:55 [World Community Grid] Finished download of ln380-389_ln388.fasta.gz
10-Feb-2008 15:37:55 [World Community Grid] Finished download of ln380-389_ln388.psipred.gz
10-Feb-2008 15:37:55 [World Community Grid] Started download of ln380-389_ln388.psipred_ss2.gz
10-Feb-2008 15:37:55 [World Community Grid] Started download of ln380-389_aaln38803_05.075_v1_3.gz
10-Feb-2008 15:37:56 [World Community Grid] Finished download of ln380-389_ln388.psipred_ss2.gz
10-Feb-2008 15:37:56 [World Community Grid] Started download of ln380-389_aaln38809_05.075_v1_3.gz
10-Feb-2008 15:37:59 [World Community Grid] Finished download of ln380-389_aaln38803_05.075_v1_3.gz
10-Feb-2008 15:38:04 [World Community Grid] Finished download of ln380-389_aaln38809_05.075_v1_3.gz
10-Feb-2008 15:50:26 [World Community Grid] Sending scheduler request: To fetch work. Requesting 457 seconds of work, reporting 0 completed tasks
10-Feb-2008 15:50:31 [World Community Grid] Scheduler request succeeded: got 1 new tasks
10-Feb-2008 15:50:34 [World Community Grid] Started download of wcg_faah_autodock_5.42_i686-pc-linux-gnu
10-Feb-2008 15:50:34 [World Community Grid] Started download of faah_image_5.42.tga
10-Feb-2008 15:50:40 [World Community Grid] Finished download of faah_image_5.42.tga
10-Feb-2008 15:50:40 [World Community Grid] Started download of faah_protease_5.42.dat
10-Feb-2008 15:50:41 [World Community Grid] Finished download of wcg_faah_autodock_5.42_i686-pc-linux-gnu
10-Feb-2008 15:50:41 [World Community Grid] Started download of wcg_faah_autodock_5.42_i686-pc-linux-gnu.so
10-Feb-2008 15:50:43 [World Community Grid] Finished download of faah_protease_5.42.dat
10-Feb-2008 15:50:43 [World Community Grid] Started download of faah3070_ZINC01704721_xMut_md19590_01_ZINC01704721.pdbqt
10-Feb-2008 15:50:46 [World Community Grid] Finished download of wcg_faah_autodock_5.42_i686-pc-linux-gnu.so
10-Feb-2008 15:50:46 [World Community Grid] Finished download of faah3070_ZINC01704721_xMut_md19590_01_ZINC01704721.pdbqt
10-Feb-2008 15:50:46 [World Community Grid] Started download of faah3070_ZINC01704721_xMut_md19590_01_AD4.1_bound.dat
10-Feb-2008 15:50:46 [World Community Grid] Started download of 243be625ff4d3877e6de46af319cf226.dpf
10-Feb-2008 15:50:47 [World Community Grid] Finished download of faah3070_ZINC01704721_xMut_md19590_01_AD4.1_bound.dat
10-Feb-2008 15:50:47 [World Community Grid] Finished download of 243be625ff4d3877e6de46af319cf226.dpf
10-Feb-2008 15:50:47 [World Community Grid] Started download of faah3070_ZINC01704721_xMut_md19590_01_ZINC01704721_xMut_md19590_01.gpf
10-Feb-2008 15:50:47 [World Community Grid] Started download of faah3070_ZINC01704721_xMut_md19590_01_xMut_md19590.pdbqt
10-Feb-2008 15:50:48 [World Community Grid] Finished download of faah3070_ZINC01704721_xMut_md19590_01_ZINC01704721_xMut_md19590_01.gpf
10-Feb-2008 15:50:49 [World Community Grid] Finished download of faah3070_ZINC01704721_xMut_md19590_01_xMut_md19590.pdbqt
10-Feb-2008 22:44:04 [World Community Grid] Computation for task ln377_00005_4 finished
10-Feb-2008 22:44:04 [World Community Grid] Starting ln388_00063_18
10-Feb-2008 22:44:04 [World Community Grid] Starting task ln388_00063_18 using hpf2 version 520
10-Feb-2008 22:44:07 [World Community Grid] Started upload of ln377_00005_4_0
10-Feb-2008 22:44:11 [World Community Grid] Finished upload of ln377_00005_4_0
10-Feb-2008 22:45:36 [World Community Grid] Computation for task ln376_00104_9 finished
10-Feb-2008 22:45:36 [World Community Grid] Starting faah3070_ZINC01704721_xMut_md19590_01_1
10-Feb-2008 22:45:36 [World Community Grid] Starting task faah3070_ZINC01704721_xMut_md19590_01_1 using faah version 542
10-Feb-2008 22:45:38 [World Community Grid] Started upload of ln376_00104_9_0
10-Feb-2008 22:45:41 [World Community Grid] Finished upload of ln376_00104_9_0
11-Feb-2008 01:14:51 [World Community Grid] Sending scheduler request: To fetch work. Requesting 185 seconds of work, reporting 2 completed tasks
11-Feb-2008 01:14:56 [World Community Grid] Scheduler request succeeded: got 1 new tasks
11-Feb-2008 01:14:58 [World Community Grid] Started download of wcg_hcc1_img_5.19_i686-pc-linux-gnu
11-Feb-2008 01:14:58 [World Community Grid] Started download of hcc1_image01_5.19.tga
11-Feb-2008 01:14:59 [World Community Grid] Finished download of hcc1_image01_5.19.tga
11-Feb-2008 01:14:59 [World Community Grid] Started download of hcc1_image02_5.19.tga
11-Feb-2008 01:15:02 [World Community Grid] Finished download of hcc1_image02_5.19.tga
11-Feb-2008 01:15:02 [World Community Grid] Started download of hcc1_image03_5.19.tga
11-Feb-2008 01:15:04 [World Community Grid] Finished download of hcc1_image03_5.19.tga
11-Feb-2008 01:15:04 [World Community Grid] Started download of hcc1_image04_5.19.tga
11-Feb-2008 01:15:07 [World Community Grid] Finished download of wcg_hcc1_img_5.19_i686-pc-linux-gnu
11-Feb-2008 01:15:07 [World Community Grid] Finished download of hcc1_image04_5.19.tga
11-Feb-2008 01:15:07 [World Community Grid] Started download of wcg_hcc1_img_5.19_i686-pc-linux-gnu.so
11-Feb-2008 01:15:07 [World Community Grid] Started download of X0000042260831200411232225_X0000042260831200411232225.jp2
11-Feb-2008 01:15:10 [World Community Grid] Finished download of X0000042260831200411232225_X0000042260831200411232225.jp2
11-Feb-2008 01:15:11 [World Community Grid] Finished download of wcg_hcc1_img_5.19_i686-pc-linux-gnu.so
11-Feb-2008 04:46:44 [World Community Grid] Sending scheduler request: To fetch work. Requesting 30 seconds of work, reporting 0 completed tasks
11-Feb-2008 04:46:49 [World Community Grid] Scheduler request succeeded: got 1 new tasks
11-Feb-2008 04:46:51 [World Community Grid] Started download of wcg_dddt_autodock_5.10_i686-pc-linux-gnu
11-Feb-2008 04:46:51 [World Community Grid] Started download of dddt_image01_5.10.tga
11-Feb-2008 04:46:53 [World Community Grid] Finished download of dddt_image01_5.10.tga
11-Feb-2008 04:46:53 [World Community Grid] Started download of dddt_image02_5.10.tga
11-Feb-2008 04:46:56 [World Community Grid] Finished download of dddt_image02_5.10.tga
11-Feb-2008 04:46:56 [World Community Grid] Started download of dddt_image03_5.10.tga
11-Feb-2008 04:46:57 [World Community Grid] Finished download of wcg_dddt_autodock_5.10_i686-pc-linux-gnu
11-Feb-2008 04:46:57 [World Community Grid] Finished download of dddt_image03_5.10.tga
11-Feb-2008 04:46:57 [World Community Grid] Started download of dddt_image04_5.10.tga
11-Feb-2008 04:46:57 [World Community Grid] Started download of dddt_image05_5.10.tga
11-Feb-2008 04:46:59 [World Community Grid] Finished download of dddt_image05_5.10.tga
11-Feb-2008 04:46:59 [World Community Grid] Started download of dddt_image06_5.10.tga
11-Feb-2008 04:47:00 [World Community Grid] Finished download of dddt_image04_5.10.tga
11-Feb-2008 04:47:00 [World Community Grid] Started download of dddt_image07_5.10.tga
11-Feb-2008 04:47:02 [World Community Grid] Finished download of dddt_image06_5.10.tga
11-Feb-2008 04:47:02 [World Community Grid] Started download of dddt_image08_5.10.tga
11-Feb-2008 04:47:03 [World Community Grid] Finished download of dddt_image07_5.10.tga
11-Feb-2008 04:47:03 [World Community Grid] Started download of dddt_image09_5.10.tga
11-Feb-2008 04:47:04 [World Community Grid] Finished download of dddt_image08_5.10.tga
11-Feb-2008 04:47:04 [World Community Grid] Started download of dddt_image10_5.10.tga
11-Feb-2008 04:47:06 [World Community Grid] Finished download of dddt_image09_5.10.tga
11-Feb-2008 04:47:06 [World Community Grid] Started download of dddt_image11_5.10.tga
11-Feb-2008 04:47:07 [World Community Grid] Finished download of dddt_image10_5.10.tga
11-Feb-2008 04:47:07 [World Community Grid] Started download of dddt_image12_5.10.tga
11-Feb-2008 04:47:09 [World Community Grid] Finished download of dddt_image11_5.10.tga
11-Feb-2008 04:47:09 [World Community Grid] Started download of dddt_image13_5.10.tga
11-Feb-2008 04:47:11 [World Community Grid] Finished download of dddt_image12_5.10.tga
11-Feb-2008 04:47:11 [World Community Grid] Started download of dddt_image14_5.10.tga
11-Feb-2008 04:47:13 [World Community Grid] Finished download of dddt_image13_5.10.tga
11-Feb-2008 04:47:13 [World Community Grid] Started download of dddt_image15_5.10.tga
11-Feb-2008 04:47:14 [World Community Grid] Finished download of dddt_image14_5.10.tga
11-Feb-2008 04:47:14 [World Community Grid] Started download of dddt_image16_5.10.tga
11-Feb-2008 04:47:15 [World Community Grid] Finished download of dddt_image15_5.10.tga
11-Feb-2008 04:47:15 [World Community Grid] Finished download of dddt_image16_5.10.tga
11-Feb-2008 04:47:15 [World Community Grid] Started download of dddt_image17_5.10.tga
11-Feb-2008 04:47:15 [World Community Grid] Started download of wcg_dddt_autodock_5.10_i686-pc-linux-gnu.so
11-Feb-2008 04:47:18 [World Community Grid] Finished download of dddt_image17_5.10.tga
11-Feb-2008 04:47:18 [World Community Grid] Started download of dddt0401e0271_ZINC02584464-0000_00_dddt0401e0271_ZINC02584464-0000_00.dpf
11-Feb-2008 04:47:20 [World Community Grid] Finished download of wcg_dddt_autodock_5.10_i686-pc-linux-gnu.so
11-Feb-2008 04:47:20 [World Community Grid] Finished download of dddt0401e0271_ZINC02584464-0000_00_dddt0401e0271_ZINC02584464-0000_00.dpf
11-Feb-2008 04:47:20 [World Community Grid] Started download of dddt0401e0271_ZINC02584464-0000_00_dddt0401e0271_ZINC02584464-0000_00.gpf
11-Feb-2008 04:47:20 [World Community Grid] Started download of dddt0401e0271_ZINC02584464-0000_00_ZINC02584464-0000.pdbqt
11-Feb-2008 04:47:22 [World Community Grid] Finished download of dddt0401e0271_ZINC02584464-0000_00_dddt0401e0271_ZINC02584464-0000_00.gpf
11-Feb-2008 04:47:22 [World Community Grid] Finished download of dddt0401e0271_ZINC02584464-0000_00_ZINC02584464-0000.pdbqt
11-Feb-2008 04:47:22 [World Community Grid] Started download of dddt0401e0271_ZINC02584464-0000_00_0401.pdbqt
11-Feb-2008 04:47:22 [World Community Grid] Started download of dddt0401e0271_ZINC02584464-0000_00_AD4_parameters.dat
11-Feb-2008 04:47:24 [World Community Grid] Finished download of dddt0401e0271_ZINC02584464-0000_00_0401.pdbqt
11-Feb-2008 04:47:24 [World Community Grid] Finished download of dddt0401e0271_ZINC02584464-0000_00_AD4_parameters.dat
11-Feb-2008 04:47:24 [World Community Grid] Started download of dddt.04.dat
11-Feb-2008 04:47:28 [World Community Grid] Finished download of dddt.04.dat
11-Feb-2008 06:11:32 [---] Starting BOINC client version 5.10.28 for i686-pc-linux-gnu
11-Feb-2008 06:11:32 [---] log flags: task, file_xfer, sched_ops
11-Feb-2008 06:11:32 [---] Libraries: libcurl/7.17.1 OpenSSL/0.9.8g zlib/1.2.3
11-Feb-2008 06:11:32 [---] Data directory: /home/heseltine/BOINC
11-Feb-2008 06:11:32 [---] Processor: 2 GenuineIntel Intel(R) Pentium(R) 4 CPU 3.20GHz [Family 15 Model 4 Stepping 1]
11-Feb-2008 06:11:32 [---] Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe constant_tsc pni monitor ds_cpl cid xtpr
11-Feb-2008 06:11:32 [---] OS: Linux: 2.6.22.16-0.1-default
11-Feb-2008 06:11:32 [---] Memory: 979.38 MB physical, 2.01 GB virtual
11-Feb-2008 06:11:32 [---] Disk: 436.77 GB total, 414.22 GB free
11-Feb-2008 06:11:32 [---] Local time is UTC -7 hours
11-Feb-2008 06:11:32 [World Community Grid] URL: http://www.worldcommunitygrid.org/; Computer ID: 494740; location: (none); project prefs: default
11-Feb-2008 06:11:32 [---] General prefs: from World Community Grid (last modified 28-Nov-2007 21:09:23)
11-Feb-2008 06:11:32 [---] Host location: none
11-Feb-2008 06:11:32 [---] General prefs: using your defaults
11-Feb-2008 06:11:32 [---] Preferences limit memory usage when active to 979.38MB
11-Feb-2008 06:11:32 [---] Preferences limit memory usage when idle to 979.38MB
11-Feb-2008 06:11:32 [---] Preferences limit disk usage to 9.31GB
11-Feb-2008 06:11:32 [World Community Grid] Restarting task ln388_00063_18 using hpf2 version 520
11-Feb-2008 06:11:32 [World Community Grid] Restarting task faah3070_ZINC01704721_xMut_md19590_01_1 using faah version 542
11-Feb-2008 07:00:30 [---] Starting BOINC client version 5.10.28 for i686-pc-linux-gnu
11-Feb-2008 07:00:30 [---] log flags: task, file_xfer, sched_ops
11-Feb-2008 07:00:30 [---] Libraries: libcurl/7.17.1 OpenSSL/0.9.8g zlib/1.2.3
11-Feb-2008 07:00:30 [---] Data directory: /home/heseltine/BOINC
11-Feb-2008 07:00:30 [---] Processor: 2 GenuineIntel Intel(R) Pentium(R) 4 CPU 3.20GHz [Family 15 Model 4 Stepping 1]
11-Feb-2008 07:00:30 [---] Processor features: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe constant_tsc pni monitor ds_cpl cid xtpr
11-Feb-2008 07:00:30 [---] OS: Linux: 2.6.22.16-0.1-default
11-Feb-2008 07:00:30 [---] Memory: 979.38 MB physical, 2.01 GB virtual
11-Feb-2008 07:00:30 [---] Disk: 436.77 GB total, 414.22 GB free
11-Feb-2008 07:00:30 [---] Local time is UTC -7 hours
11-Feb-2008 07:00:30 [World Community Grid] URL: http://www.worldcommunitygrid.org/; Computer ID: 494740; location: (none); project prefs: default
11-Feb-2008 07:00:30 [---] General prefs: from World Community Grid (last modified 28-Nov-2007 21:09:23)
11-Feb-2008 07:00:30 [---] Host location: none
11-Feb-2008 07:00:30 [---] General prefs: using your defaults
11-Feb-2008 07:00:30 [---] Preferences limit memory usage when active to 979.38MB
11-Feb-2008 07:00:30 [---] Preferences limit memory usage when idle to 979.38MB
11-Feb-2008 07:00:30 [---] Preferences limit disk usage to 9.31GB
11-Feb-2008 07:00:30 [World Community Grid] Restarting task ln388_00063_18 using hpf2 version 520
11-Feb-2008 07:00:30 [World Community Grid] Restarting task faah3070_ZINC01704721_xMut_md19590_01_1 using faah version 542


============== End stdoutdae.txt =================
[Feb 11, 2008 2:11:36 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Former Member
Cruncher
Joined: May 22, 2018
Post Count: 0
Status: Offline
Reply to this Post  Reply with Quote 
Re: successful Boinc new install (Linux) dies

I have tried to copy out the process table from KDE System Guard, but not luck. It shows Boinc and Boinc Manager, and 3 wcg_hpf2_rosetta_5.20_i686-pc-linux-gnu processess, none active. KDE system guard is acting oddly as it is showing unnamed processes, and various commands are shown but the only ones active are ksyguard, xorg, and a few others.

Anyway, there ye be. Any thoughts?

Mark
[Feb 11, 2008 2:27:10 PM]   Link   Report threatening or abusive post: please login first  Go to top 
Sekerob
Ace Cruncher
Joined: Jul 24, 2005
Post Count: 20043
Status: Offline
Reply to this Post  Reply with Quote 
Re: successful Boinc new install (Linux) dies

Those log messages are perfect.

BOINCmgr connecting to BOINC core client is not critical for the client to run successfully. If you open up BOINCmgr, find the Advanced manager, Selected Computer and leaving the fields blank, say okay. If that fails, try again typing localhost. The password should get autofilled. If it does say okay. If that does not work, report back.

ttyl.
----------------------------------------
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[Feb 11, 2008 2:28:03 PM]   Link   Report threatening or abusive post: please login first  Go to top 
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